Dataset: Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens



Paired-trimmed-un-mapped reads (hg19) generated for each sample have been submitted to SRA under project number SRP126380
cgMLST and accessory ref-seq
Date made available10-May-2018
PublisherUniversity of Groningen

Keywords on Datasets

  • Health
  • Shotgun metagenomics
  • Microbiology
  • SMg
  • Escherichia coli
  • E-coli
  • Staphylococcus epidermidis
  • antimicrobial resistance

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