Groningen Biomolecular Sciences and Biotechnology Institute

Search results

• Additional file 2: of Time-resolved dual RNA-seq reveals extensive rewiring of lung epithelial and pneumococcal transcriptomes during early infection

  Aprianto, R. (Contributor), Slager, J. (Creator), Holsappel, S. (Contributor) & Veening, J.-W. (Contributor), figshare, 27-Sept-2016

  DOI: 10.6084/m9.figshare.c.3645692_d2, https://figshare.com/articles/Additional_file_2_of_Time-resolved_dual_RNA-seq_reveals_extensive_rewiring_of_lung_epithelial_and_pneumococcal_transcriptomes_during_early_infection/4472795

  Dataset

• Combinatorial RiPP biosynthesis for the generation of gene-encoded new-to-nature peptide antimicrobials

  Ruijne, F. (Creator), DataverseNL, 1-Jun-2023

  DOI: 10.34894/v5o7ue

  Dataset

• Additional file 3: of FitTetra 2.0 â improved genotype calling for tetraploids with multiple population and parental data support

  Zych, K. (Contributor), Gort, G. (Contributor), Maliepaard, C. A. (Creator), Jansen, R. C. (Contributor) & Voorrips, R. E. (Contributor), figshare, 20-Mar-2019

  DOI: 10.6084/m9.figshare.7872920

  Dataset

• Additional file 4: of FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support

  Zych, K. (Contributor), Gort, G. (Contributor), Maliepaard, C. A. (Contributor), Jansen, R. C. (Contributor) & Voorrips, R. E. (Contributor), University of Groningen, 20-Mar-2019

  DOI: 10.6084/m9.figshare.7872926.v1

  Dataset

• CCDC 1991058: Experimental Crystal Structure Determination

  Venturi, S. (Contributor), Brenna, E. (Contributor), Colombo, D. (Contributor), Fraaije, M. W. (Contributor), Gatti, F. G. (Contributor), Macchi, P. (Contributor), Monti, D. (Contributor), Trajkovic, M. (Contributor) & Zamboni, E. (Contributor), The Cambridge Structural Database, 17-Mar-2020

  DOI: 10.5517/ccdc.csd.cc24tvpj

  Dataset

• CCDC 1539905: Experimental Crystal Structure Determination

  Lampel, A. (Contributor), McPhee, S. A. (Contributor), Park, H.-A. (Contributor), Scott, G. G. (Contributor), Humagain, S. (Contributor), Hekstra, D. R. (Contributor), Yoo, B. (Contributor), Frederix, P. (Contributor), Li, T.-D. (Contributor), Abzalimov, R. R. (Contributor), Greenbaum, S. G. (Contributor), Tuttle, T. (Contributor), Hu, C. (Contributor), Bettinger, C. J. (Contributor) & Ulijn, R. V. (Contributor), University of Groningen, 23-Mar-2017

  DOI: 10.5517/ccdc.csd.cc1npdc3

  Dataset

• Dataset Figure_2: Determination of nuclear Whi5 concentration by widefield fluorescence microscopy is confounded by non-proportional scaling of the nuclear-to-cell volume

  Litsios, A. (Contributor), Goswami, P. (Contributor), Terpstra, H. (Contributor), Coffin, C. (Contributor), Vuillemenot, L.-A. P. E. (Contributor), Rovetta, M. (Contributor), Ghazal, G. (Contributor), Guerra, P. (Contributor), Buczak, K. (Contributor), Schmidt, A. (Contributor), Tollis, S. (Contributor), Tyers, M. (Contributor), Royer, C. A. (Contributor), Milias-Argeitis, A. (Contributor) & Heinemann, M. (Contributor), DataverseNL, 24-Feb-2022

  DOI: 10.34894/tfc012

  Dataset

• Giant worm-shaped ESCRT-scaffolds surround actin-independent integrin clusters, data part 6

  Stempels, F. (Creator), Jiang, M. (Creator), Warner, H. (Contributor), Moser, M.-L. (Creator), Janssens, M. (Contributor), Maassen, S. (Contributor), Nelen, I. (Creator), de Boer, R. (Contributor), Jiemy, W. (Contributor), Knight, D. (Contributor), Selley, J. (Contributor), O'Cualain, R. (Contributor), Baranov, M. V. (Contributor), Burgers, T. C. Q. (Contributor), Sansevrino, R. (Contributor), Milovanovic, D. (Contributor), Heeringa, P. (Contributor), Jones, M. C. (Contributor), Vlijm, R. (Contributor), ter Beest, M. (Contributor) & van den Bogaart, G. (Contributor), ZENODO, 2-Feb-2023

  DOI: 10.5281/zenodo.7600213

  Dataset

• Additional file 1 of Genome-wide inference of regulatory networks in Streptomyces coelicolor

  Castro-Melchor, M. (Contributor), Charaniya, S. (Contributor), Karypis, G. (Contributor), Takano, E. (Contributor) & Hu, W.-S. (Contributor), figshare, 16-Apr-2021

  DOI: 10.6084/m9.figshare.14436572

  Dataset

• A molecular view on the escape of lipoplexed DNA from the endosome (no trajectories)

  Bruininks, B. (Contributor), Telles de Souza, P. (Contributor), Ingolffson, H. (Contributor) & Marrink, S. (Contributor), University of Groningen, 22-Apr-2020

  DOI: 10.5061/dryad.fqz612jq4, https://zenodo.org/record/4941166

  Dataset

• SWAP70 is a universal GEF-like adaptor for tethering actin to phagosomes

  Baranov, M. V. (Contributor), Revelo, N. H. (Contributor), Verboogen, D. R. J. (Contributor), ter Beest, M. (Contributor) & van den Bogaart, G. (Contributor), figshare Academic Research System, 28-May-2019

  DOI: 10.6084/m9.figshare.8192162.v1

  Dataset

• SupplementaryDataChapter2

  Leupold, S. (Contributor), ZENODO, 28-Aug-2018

  DOI: 10.5281/zenodo.1405146

  Dataset

• Additional file 1: of Quantitative modeling and analytic assessment of the transcription dynamics of the XlnR regulon in Aspergillus niger

  Omony, J. (Contributor), Mach-Aigner, A. R. (Contributor), van Straten, G. (Contributor) & van Boxtel, A. J. B. (Contributor), University of Groningen, 29-Jan-2016

  DOI: 10.6084/m9.figshare.c.3598823_d1.v1

  Dataset

• Flux balance analysis for comparison of CORE with other pathways

  Satanowski, A. (Creator), Marchal, D. (Creator), He, H. (Creator), Smith, E. N. (Creator) & Erb, T. (Creator), Edmond, 10-Feb-2025

  DOI: 10.17617/3.v8kjfv

  Dataset

• Biometric Recognition of African Clawed Frogs

  Prins, F. L. (Creator), Tomanin, D. (Creator), Kamenz, J. (Creator) & Azzopardi, G. (Creator), University of Groningen, 11-Jul-2023

  DOI: 10.34894/PYPNU6

  Dataset

• Table S2 from Kinetoplastid kinetochore proteins KKT14-KKT15 are divergent Bub1/BubR1-Bub3 proteins

  Ballmer, D. (Creator), Carter, W. (Creator), van Hooff, J. J. E. (Creator), Tromer, E. C. (Creator), Ishii, M. (Creator), Ludzia, P. (Creator) & Akiyoshi, B. (Creator), figshare, 2-May-2024

  DOI: 10.6084/m9.figshare.25737656.v1

  Dataset

• Datasets to: Structure and mechanism of a bacterial haloalcohol dehalogenase: a new variation of the short‐chain dehydrogenase/reductase fold without an NAD(P)H binding site

  Jong, R. M. D. (Creator), Tiesinga, J. J. W. (Creator), Rozeboom, H. (Creator), Kalk, K. H. (Creator), Tang, L. (Creator), Janssen, D. (Creator) & Dijkstra, B. W. (Creator), European Bioinformatics Institute (EMBL-EBI), 7-Oct-2003

  https://www.ebi.ac.uk/pdbe/entry/pdb/1pwx and one more link, https://www.ebi.ac.uk/pdbe/entry/pdb/1pwz (show fewer)

  Dataset

• Table S3 from Kinetoplastid kinetochore proteins KKT14-KKT15 are divergent Bub1/BubR1-Bub3 proteins

  Ballmer, D. (Creator), Carter, W. (Creator), van Hooff, J. J. E. (Creator), Tromer, E. C. (Creator), Ishii, M. (Creator), Ludzia, P. (Creator) & Akiyoshi, B. (Creator), figshare, 2-May-2024

  DOI: 10.6084/m9.figshare.25737665.v1

  Dataset

• Additional file 2 of Gut bacterial deamination of residual levodopa medication for Parkinson’s disease

  van Kessel, S. (Contributor), Nelemans, S. A. (Contributor), El Aidy, S. (Contributor), Winkel, S. (Contributor), Jong ,de, H. (Contributor), Keshavarzian, A. (Contributor), van Leeuwen, S. (Contributor) & Permentier, H. (Contributor), University of Groningen, 20-Oct-2020

  DOI: 10.6084/m9.figshare.13115490.v1

  Dataset

• Simulation Parameters for Two Cooperative Binding Sites Sensitize PI(4,5)P2 Recognition by the Tubby Domain

  Thallmair, V. (Contributor), Schultz, L. (Contributor), Zhao, W. (Creator), Marrink, S. J. (Contributor), Oliver, D. (Contributor) & Thallmair, T. (Contributor), ZENODO, 27-May-2022

  DOI: 10.5281/zenodo.6587156

  Dataset

• Additional file 8 of Staphylococcus aureus populations from the gut and the blood are not distinguished by virulence traits—a critical role of host barrier integrity

  Raineri, E. (Creator), Maass, S. (Contributor), Wang, M. (Creator), Brushett, S. (Creator), Palma Medina, L. (Creator), Sampol Escandell, N. (Creator), Altulea, D. H. A. (Creator), Raangs, E. (Creator), de Jong, A. (Creator), Vera Murguía, E. (Contributor), Feil, E. J. (Creator), Friedrich, A. W. (Creator), Buist, G. (Creator), Becher, D. (Creator), Garcia Cobos, S. (Creator), Monge Gomes do Couto, N. (Creator) & van Dijl, J. M. (Creator), figshare, 13-Aug-2024

  DOI: 10.6084/m9.figshare.26557406, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_Staphylococcus_aureus_populations_from_the_gut_and_the_blood_are_not_distinguished_by_virulence_traits_a_critical_role_of_host_barrier_integrity/26557406

  Dataset

• Additional file 2 of Parameter inference for stochastic single-cell dynamics from lineage tree data

  Kuzmanovska, I. (Creator), Milias-Argeitis, A. (Creator), Mikelson, J. (Creator), Zechner, C. (Creator) & Khammash, M. (Creator), figshare, 26-Apr-2017

  DOI: 10.6084/m9.figshare.c.3756902_d2, https://figshare.com/articles/Additional_file_2_of_Parameter_inference_for_stochastic_single-cell_dynamics_from_lineage_tree_data/4923560

  Dataset

• Data from: A Worldwide Competition to Compare the Speed and Chemotactic Accuracy of Neutrophil-Like Cells

  Skoge, M. (Creator), Wong, E. (Creator), Hamza, B. (Creator), Bae, A. (Creator), Martel, J. (Creator), Kataria, R. (Creator), Gunnink, A. (Creator), Kortholt, A. (Creator), van Haastert, P. (Creator), Charras, G. (Creator), Janetopoulos, C. (Creator) & Irimia, D. (Creator), University of Groningen, 24-Mar-2016

  https://figshare.com/s/ebf97b9cf877696dc20a

  Dataset

• CCDC 1991057: Experimental Crystal Structure Determination

  Venturi, S. (Contributor), Brenna, E. (Contributor), Colombo, D. (Contributor), Fraaije, M. W. (Contributor), Gatti, F. G. (Contributor), Macchi, P. (Contributor), Monti, D. (Contributor), Trajkovic, M. (Contributor) & Zamboni, E. (Contributor), The Cambridge Structural Database, 17-Mar-2020

  DOI: 10.5517/ccdc.csd.cc24tvnh

  Dataset

• Giant worm-shaped ESCRT-scaffolds surround actin-independent integrin clusters, data part 5

  Stempels, F. (Creator), Jiang, M. (Creator), Warner, H. (Contributor), Moser, M.-L. (Creator), Janssens, M. (Contributor), Maassen, S. (Contributor), Nelen, I. (Creator), de Boer, R. (Contributor), Jiemy, W. (Contributor), Knight, D. (Contributor), Selley, J. (Contributor), O'Cualain, R. (Contributor), Baranov, M. V. (Contributor), Burgers, T. C. Q. (Contributor), Sansevrino, R. (Contributor), Milovanovic, D. (Contributor), Heeringa, P. (Contributor), Jones, M. C. (Contributor), Vlijm, R. (Contributor), ter Beest, M. (Contributor) & van den Bogaart, G. (Contributor), ZENODO, 2-Feb-2023

  DOI: 10.5281/zenodo.7600209

  Dataset