Research output per year
Research output per year
Every living organism, from bacteria to plants and humans, is expected to harbor several viruses. These obligate cellular parasites arguably represent one of the most diverse biological entities known to us. Thanks to high-throughput sequencing in the last decade, the number of new viruses discovered has skyrocketed. However, very little is known about these viruses' transmission, evolution, and impact (i.e., their ecology) and how most viruses interact with their host.
Our group focuses on RNA viruses infecting eukaryotes, from unicellular organisms to whales. While we work on a wide range of hosts, we have a special place in our hearts for insects (including mosquitoes). Using an integrated combination of "wet" (experimental evolution, fieldwork, high-throughput sequencing) and "dry" (bioinformatics, phylodynamics, modeling, and simulations) approaches, we explore virus diversity and evolution across scales: from within- to between-hosts, from small transmission chains to epidemics and from deep to recent evolutionary processes.
Because viral evolution takes place at the same time scale as viral ecological processes, our work also uncovers elements of viral ecology: How do they spread? Where do they come from? What is their host range? What is their impact on their hosts? All critical pieces of information to understand and manage their impact on us, our domesticated animals and plants, our ecosystems, and even our biosphere.
Person: Scientific Staff
Person: Scientific Staff
Person: Scientific Staff
Research output: Contribution to journal › Review article › peer-review
Research output: Contribution to journal › Article › Academic › peer-review
Research output: Contribution to journal › Article › Academic › peer-review
Lequime, S. (Organiser) & Hackl, T. (Organiser)
Activity: Organising and attending an event › Organising and contributing to an event › Academic
Lequime, S. (Speaker)
Activity: Talk and presentation › Academic presentation › Academic
Lequime, S. (Contributor)
Activity: Organising and attending an event › Organising and contributing to an event › Academic
Viginier, B. (Creator), Cappuccio, L. (Creator), Garnier, C. (Creator), Martin, E. (Creator), Maisse, C. (Creator), Valiente Moro, C. (Creator), Minard, G. (Creator), Fontaine, A. (Creator), Lequime, S. (Creator), Ratinier, M. (Creator), Arnaud , F. (Creator) & Raquin, V. (Creator), ZENODO, 13-Jun-2023
Dataset
Brait, N. (Contributor), Külekçi, B. (Contributor) & Goerzer, I. (Contributor), figshare, 7-Jan-2022
DOI: 10.6084/m9.figshare.17983013.v1
Dataset
31/05/2022
1 item of Media coverage
Press/Media: Expert Comment › Popular
12/03/2022 → 13/03/2022
3 items of Media coverage
Press/Media: Expert Comment › Popular
11/02/2022 → 14/02/2022
4 items of Media coverage
Press/Media: Expert Comment › Popular
Lequime, S. (PI)
01/04/2023 → 01/04/2024
Project: Research
Lequime, S. (PI), Falcao Salles, J. (PI) & Brait, N. (PhD student)
01/11/2020 → 01/11/2024
Project: Research
Brait, N. (Recipient), Lequime, S. (Recipient) & Hackl, T. (Recipient), 7-Nov-2024
Prize › Academic