Danny Incarnato

Phone+31 50 363 2103, +31 50 363 2368
EmailD.Incarnatorugnl

Nijenborgh7, Gebouw
9747 AG Groningen
Netherlands

Expertise related to UN Sustainable Development Goals

In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):

SDG 3 Good Health and Well-being
SDG 13 Climate Action

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Dive into the research topics where Danny Incarnato is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

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63 Article
3 Chapter
3 Review article

Condition-dependent amorphous protein agglomerates control cytoplasmic rheology
Losa, J., Simon, F., Linnik, D., Kaya, S. G., Stuart, M. C. A., Stetsenko, A., de Boer, R., Ho, F. Y., Incarnato, D., Stevens, J., van Eck, J., Fraaije, M. W., Weiss, L. E., van Teeffelen, S., Abeln, S., Guskov, A., Marrink, S.-J., Poolman, B. & Heinemann, M., 10-Apr-2026, (E-pub ahead of print) In: Molecular Cell. 86, 29 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File
1 Downloads (Pure)
RNA functional modulation by Mitoxantrone via RNA structural ensemble repartitioning
Zhang, C., Borovská, I., Iobashvili, T., Morandi, E., Lionnez, M., Olayinka, O. S., de Boer, R., Clamer, M., Witte, M. D., Pors, K., Schneekloth, J. S. & Incarnato, D., 23-Mar-2026, (E-pub ahead of print) In: Nature Communications. 52 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File
Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis
Borovská, I., Zhang, C., Dülk, S. L. J., Morandi, E., Cardoso, M. F. S., Bourkia, B. M., van den Homberg, D. A. L., Wolfinger, M. T., Velema, W. A. & Incarnato, D., 25-Jul-2025, (E-pub ahead of print) In: Nature Biotechnology. 21 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File
4 Citations (Scopus)

11 Downloads (Pure)
Low butyrate concentrations exert anti-inflammatory and high concentrations exert pro-inflammatory effects on macrophages
Jiang, M., Incarnato, D., Modderman, R., Lazaro, A. A., Jonkers, I. H., Bianchi, F. & van den Bogaart, G., Oct-2025, In: Journal of Nutritional Biochemistry. 144, 12 p., 109962.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File
16 Citations (Scopus)

58 Downloads (Pure)
Nucleotide dependency analysis of genomic language models detects functional elements
Tomaz da Silva, P., Karollus, A., Hingerl, J., Galindez, G. S. T., Wagner, N., Hernandez-Alias, X., Incarnato, D. & Gagneur, J., Oct-2025, In: Nature genetics. 57, 10, p. 2589-2602 32 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File
2 Citations (Scopus)

7 Downloads (Pure)

Dutch RNA Club
Incarnato, D. (Organiser)
9-Jun-2023
Activity: Organising and attending an event › Organising and contributing to an event › Academic
The RNA Structures Conference 2021
Incarnato, D. (Organiser)
24-Jun-2021 → 25-Jun-2021
Activity: Organising and attending an event › Organising and contributing to an event › Academic

Additional file 11 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure
Divisato, G. (Contributor), Chiariello, A. M. (Contributor), Esposito, A. (Contributor), Zoppoli, P. (Contributor), Zambelli, F. (Contributor), Elia, M. A. (Contributor), Pesole, G. (Contributor), Incarnato, D. (Contributor), Passaro, F. (Contributor), Piscitelli, S. (Contributor), Oliviero, S. (Contributor), Nicodemi, M. (Contributor), Parisi, S. (Contributor) & Russo, T. (Contributor), figshare Academic Research System, 3-Aug-2022
DOI: 10.6084/m9.figshare.20423921.v1
Dataset
Additional file 3 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure
Divisato, G. (Contributor), Chiariello, A. M. (Contributor), Esposito, A. (Contributor), Zoppoli, P. (Contributor), Zambelli, F. (Contributor), Elia, M. A. (Contributor), Pesole, G. (Contributor), Incarnato, D. (Contributor), Passaro, F. (Contributor), Piscitelli, S. (Contributor), Oliviero, S. (Contributor), Nicodemi, M. (Contributor), Parisi, S. (Contributor) & Russo, T. (Contributor), figshare Academic Research System, 3-Aug-2022
DOI: 10.6084/m9.figshare.20423939.v1
Dataset
Additional file 14 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure
Divisato, G. (Contributor), Chiariello, A. M. (Contributor), Esposito, A. (Contributor), Zoppoli, P. (Contributor), Zambelli, F. (Contributor), Elia, M. A. (Contributor), Pesole, G. (Contributor), Incarnato, D. (Contributor), Passaro, F. (Contributor), Piscitelli, S. (Contributor), Oliviero, S. (Contributor), Nicodemi, M. (Contributor), Parisi, S. (Contributor) & Russo, T. (Contributor), figshare Academic Research System, 3-Aug-2022
DOI: 10.6084/m9.figshare.20423930.v1
Dataset
Additional file 9 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure
Divisato, G. (Contributor), Chiariello, A. M. (Contributor), Esposito, A. (Contributor), Zoppoli, P. (Contributor), Zambelli, F. (Contributor), Elia, M. A. (Contributor), Pesole, G. (Contributor), Incarnato, D. (Contributor), Passaro, F. (Contributor), Piscitelli, S. (Contributor), Oliviero, S. (Contributor), Nicodemi, M. (Contributor), Parisi, S. (Contributor) & Russo, T. (Contributor), Springer, 3-Aug-2022
DOI: 10.6084/m9.figshare.20423960.v1
Dataset
Additional file 2 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure
Divisato, G. (Contributor), Chiariello, A. M. (Contributor), Esposito, A. (Contributor), Zoppoli, P. (Contributor), Zambelli, F. (Contributor), Elia, M. A. (Contributor), Pesole, G. (Contributor), Incarnato, D. (Contributor), Passaro, F. (Contributor), Piscitelli, S. (Contributor), Oliviero, S. (Contributor), Nicodemi, M. (Contributor), Parisi, S. (Contributor) & Russo, T. (Contributor), figshare Academic Research System, 3-Aug-2022
DOI: 10.6084/m9.figshare.20423936.v1
Dataset

HMN 2026: How Binding to RNA is not enough - changing its shape is what makes a drug work
Incarnato, D.
06/04/2026
1 item of Media coverage
Press/Media: Research › Popular
Researchers Highlights How RNA Shape Changes Drive Drug Function
Incarnato, D.
30/03/2026
1 item of Media coverage
Press/Media: Expert Comment › Popular
Binding to RNA is not enough—changing its shape is what makes a drug work, study reveals
Incarnato, D.
29/03/2026
2 items of Media coverage
Press/Media: Expert Comment › Popular
Binding to RNA is not enough—changing its shape is what makes a drug work, study reveals
Incarnato, D.
29/03/2026
2 items of Media coverage
Press/Media: Expert Comment › Popular
Why Most RNA-Targeting Drugs Fail
Incarnato, D.
27/03/2026
1 item of Media coverage
Press/Media: Expert Comment › Popular

ERC Consolidator Grant
Incarnato, D. (Recipient), 23-Nov-2023
Prize: Fellowship awarded competitively › Academic

Danny Incarnato, PhD

Personal profile

Expertise related to UN Sustainable Development Goals

Fingerprint

Collaborations and top research areas from the last five years

Dive into details

Condition-dependent amorphous protein agglomerates control cytoplasmic rheology

RNA functional modulation by Mitoxantrone via RNA structural ensemble repartitioning

Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis

Low butyrate concentrations exert anti-inflammatory and high concentrations exert pro-inflammatory effects on macrophages

Nucleotide dependency analysis of genomic language models detects functional elements

Dutch RNA Club

The RNA Structures Conference 2021

Additional file 11 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

Additional file 3 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

Additional file 14 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

Additional file 9 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

Additional file 2 of Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

HMN 2026: How Binding to RNA is not enough - changing its shape is what makes a drug work

Researchers Highlights How RNA Shape Changes Drive Drug Function

Binding to RNA is not enough—changing its shape is what makes a drug work, study reveals

Binding to RNA is not enough—changing its shape is what makes a drug work, study reveals

Why Most RNA-Targeting Drugs Fail

ERC Consolidator Grant

Danny Incarnato, PhD

Personal profile

Expertise related to UN Sustainable Development Goals

Fingerprint

Collaborations and top research areas from the last five years

Research output

Activities

Datasets

Press/Media

Prizes