Freerk van Dijk

If you made any changes in Pure these will be visible here soon.

25 Article
3 Meeting Abstract
2 Letter
1 Software

Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS
BIOS Consortium, Brain MEND Consortium, Hop, P. J., Zwamborn, R. A. J., Hannon, E., Shireby, G. L., Nabais, M. F., Walker, E. M., van Rheenen, W., van Vugt, J. J. F. A., Dekker, A. M., Westeneng, H. J., Tazelaar, G. H. P., van Eijk, K. R., Moisse, M., Baird, D., Al Khleifat, A., Iacoangeli, A., Ticozzi, N., Ratti, A., & 25 othersCooper-Knock, J., Morrison, K. E., Shaw, P. J., Basak, A. N., Chiò, A., Calvo, A., Moglia, C., Canosa, A., Brunetti, M., Grassano, M., Gotkine, M., Lerner, Y., Zabari, M., Vourc'H, P., Corcia, P., Couratier, P., Mora Pardina, J. S., Salas, T., Dion, P., Ross, J. P., Henderson, R. D., Mathers, S., McCombe, P. A., Needham, M. & Veldink, J. H., 23-Feb-2022, In: Science Translational Medicine. 14, 633, 16 p., eabj0264.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File

15 Citations (Scopus)

21 Downloads (Pure)
Posttranscriptional Regulation of the Human LDL Receptor by the U2-Spliceosome
Zanoni, P., Panteloglou, G., Othman, A., Haas, J. T., Meier, R., Rimbert, A., Futema, M., Abou-Khalil, Y., Nørrelykke, S. F., Rzepiela, A., Stoma, S., Stebler, M., Dijk, F. V., Wijers, M., Wolters, J. C., Dalila, N., Huijkman, N., Smit, M., Gallo, A., Carreau, V., & 26 othersPhilippi, A., Rabès, J-P., Boileau, C., Visentin, M., Vonghia, L., Weyler, J., Francque, S., Verrijken, A., Verhaegen, A., Van Gaal, L. F., van der Graaf, A., van Rosmalen, B. V., Robert, J., Velagapudi, S., Yalcinkaya, M., Keel, M., Radosavljevic, S., Geier, A., Tybjærg-Hansen, A., Varret, M., Rohrer, L., Humphries, S. E., Staels, B., van de Sluis, B., Kuivenhoven, J. A. & Von Eckardstein, A., 7-Jan-2022, In: Circulation research. 130, 1, p. 80-95
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File

3 Citations (Scopus)

13 Downloads (Pure)
Feasibility of predicting allele specific expression from DNA sequencing using machine learning
Zhang, Z., van Dijk, F., de Klein, N., van Gijn, M. E., Franke, L. H., Sinke, R. J., Swertz, M. A. & van der Velde, K. J., 19-May-2021, In: Scientific Reports. 11, 1, 11 p., 10606.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File

2 Citations (Scopus)

31 Downloads (Pure)
A characterization of cis- and trans-heritability of RNA-Seq-based gene expression
BIOS Consortium, Ouwens, K. G., Jansen, R., Nivard, M. G., van Dongen, J., Frieser, M. J., Hottenga, J-J., Arindrarto, W., Claringbould, A., van Iterson, M., Mei, H. & Franke, L., 1-Feb-2020, In: European Journal of Human Genetics. 28, 2, p. 253-263 11 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File

12 Citations (Scopus)

34 Downloads (Pure)
A common variant in CCDC93 protects against myocardial infarction and cardiovascular mortality by regulating endosomal trafficking of low-density lipoprotein receptor
Biobank Based Int, 1-Mar-2020, In: European Heart Journal. 41, 9, p. 1040-1053 14 p.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
File

13 Citations (Scopus)

95 Downloads (Pure)

Additional file 7 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
van Galen, M. (Contributor), Luijk, R. (Contributor), van der Kallen, C. J. H. (Contributor), 't Hoen, P. A. C. (Contributor), van der Breggen, R. (Contributor), van Dongen, J. (Contributor), van Heemst, D. (Contributor), van Iterson, M. (Contributor), van Rooij, J. (Contributor), Lakenberg, N. (Contributor), van 't Hof, P. (Contributor), Verkerk, M. (Contributor), Vermaat, M. (Contributor), Beekman, M. (Contributor), Verbiest, M. (Contributor), Boomsma, D. I. (Contributor), Jhamai, P. M. (Contributor), Bot, J. (Contributor), Suchiman, H. E. D. (Contributor), Franke, L. (Contributor), Heijmans, B. T. (Contributor), Hottenga, J. J. (Contributor), Moed, M. (Contributor), Deelen, J. (Contributor), Deelen, P. (Contributor), Nooren, I. (Contributor), Jansen, R. (Contributor), Swertz, M. (Contributor), 't Hoen, P. (Contributor), Zhernakova, S. (Contributor), van Dijk, F. (Contributor), Pool, R. (Contributor), Hofman, B. A. (Contributor), van den Berg, L. H. (Contributor), Uitterlinden, A. G. (Contributor), Bonder, M. J. (Contributor), Kielbasa, S. M. (Contributor), van Meurs, J. (Contributor), Eline Slagboom (Contributor), Stehouwer, C. D. A. (Contributor), Tigchelaar - Feenstra, E. (Contributor), Zhernakova, D. (Contributor), Schalkwijk, C. G. (Contributor), Mei, H. (Contributor), Arindrarto, W. (Contributor), Wijmenga, C. (Contributor), van Zwet, E. W. (Contributor), van Duijn, C. M. (Contributor), Veldink, J. H. (Contributor), Isaacs, A. (Contributor) & van Greevenbroek, M. M. J. (Contributor), University of Groningen, 28-Jan-2017
DOI: 10.6084/m9.figshare.c.3676579_d5.v1, https://doi.org/10.6084%2Fm9.figshare.c.3676579_d5.v1
Dataset
Additional file 3 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
Hofman, B. A. (Contributor), Arindrarto, W. (Contributor), Mei, H. (Contributor), van der Kallen, C. J. H. (Contributor), Schalkwijk, C. G. (Contributor), van Dongen, J. (Contributor), Eline Slagboom (Contributor), van den Berg, L. H. (Contributor), Luijk, R. (Contributor), Jansen, R. (Contributor), 't Hoen, P. A. C. (Contributor), Lakenberg, N. (Contributor), van Galen, M. (Contributor), Heijmans, B. T. (Contributor), Verbiest, M. (Contributor), Wijmenga, C. (Contributor), Bonder, M. J. (Contributor), Beekman, M. (Contributor), Kielbasa, S. M. (Contributor), van 't Hof, P. (Contributor), van Rooij, J. (Contributor), van Heemst, D. (Contributor), Deelen, P. (Contributor), Uitterlinden, A. G. (Contributor), Pool, R. (Contributor), Vermaat, M. (Contributor), Verkerk, M. (Contributor), van Duijn, C. M. (Contributor), Isaacs, A. (Contributor), Moed, M. (Contributor), van Iterson, M. (Contributor), Stehouwer, C. D. A. (Contributor), Tigchelaar - Feenstra, E. (Contributor), Suchiman, H. E. D. (Contributor), Zhernakova, D. (Contributor), van Greevenbroek, M. M. J. (Contributor), van der Breggen, R. (Contributor), Swertz, M. (Contributor), Veldink, J. H. (Contributor), Boomsma, D. I. (Contributor), Bot, J. (Contributor), van Meurs, J. (Contributor), Jhamai, P. M. (Contributor), Deelen, J. (Contributor), 't Hoen, P. (Contributor), Zhernakova, S. (Contributor), Nooren, I. (Contributor), Hottenga, J. J. (Contributor), Franke, L. (Contributor), van Zwet, E. W. (Contributor) & van Dijk, F. (Contributor), University of Groningen, 28-Jan-2017
DOI: 10.6084/m9.figshare.c.3676579_d4.v1, https://doi.org/10.6084%2Fm9.figshare.c.3676579_d4.v1
Dataset
Additional file 4 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
van der Breggen, R. (Contributor), Hofman, B. A. (Contributor), Pool, R. (Contributor), Nooren, I. (Contributor), Deelen, P. (Contributor), Vermaat, M. (Contributor), Zhernakova, S. (Contributor), van Zwet, E. W. (Contributor), Heijmans, B. T. (Contributor), Moed, M. (Contributor), van den Berg, L. H. (Contributor), Arindrarto, W. (Contributor), Suchiman, H. E. D. (Contributor), Zhernakova, D. (Contributor), van 't Hof, P. (Contributor), van Dongen, J. (Contributor), Bonder, M. J. (Contributor), Tigchelaar - Feenstra, E. (Contributor), Schalkwijk, C. G. (Contributor), Kielbasa, S. M. (Contributor), van Iterson, M. (Contributor), van der Kallen, C. J. H. (Contributor), van Duijn, C. M. (Contributor), Deelen, J. (Contributor), Veldink, J. H. (Contributor), van Heemst, D. (Contributor), 't Hoen, P. (Contributor), Mei, H. (Contributor), Jhamai, P. M. (Contributor), van Dijk, F. (Contributor), Jansen, R. (Contributor), Eline Slagboom (Contributor), Luijk, R. (Contributor), Wijmenga, C. (Contributor), van Rooij, J. (Contributor), Bot, J. (Contributor), Lakenberg, N. (Contributor), van Galen, M. (Contributor), Isaacs, A. (Contributor), Boomsma, D. I. (Contributor), 't Hoen, P. A. C. (Contributor), van Meurs, J. (Contributor), Verkerk, M. (Contributor), Stehouwer, C. D. A. (Contributor), Beekman, M. (Contributor), Swertz, M. (Contributor), Uitterlinden, A. G. (Contributor), Franke, L. (Contributor), Hottenga, J. J. (Contributor), Verbiest, M. (Contributor) & van Greevenbroek, M. M. J. (Contributor), University of Groningen, 28-Jan-2017
DOI: 10.6084/m9.figshare.c.3676579_d6.v1, https://doi.org/10.6084%2Fm9.figshare.c.3676579_d6.v1
Dataset
Additional file 6 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
't Hoen, P. A. C. (Contributor), Verbiest, M. (Contributor), Vermaat, M. (Contributor), Tigchelaar - Feenstra, E. (Contributor), Verkerk, M. (Contributor), Heijmans, B. T. (Contributor), van der Breggen, R. (Contributor), Nooren, I. (Contributor), Isaacs, A. (Contributor), 't Hoen, P. (Contributor), Lakenberg, N. (Contributor), Mei, H. (Contributor), van Dijk, F. (Contributor), Wijmenga, C. (Contributor), Zhernakova, D. (Contributor), van Heemst, D. (Contributor), Boomsma, D. I. (Contributor), Stehouwer, C. D. A. (Contributor), Deelen, J. (Contributor), Bonder, M. J. (Contributor), Hofman, B. A. (Contributor), Schalkwijk, C. G. (Contributor), Bot, J. (Contributor), Zhernakova, S. (Contributor), Kielbasa, S. M. (Contributor), van Duijn, C. M. (Contributor), Franke, L. (Contributor), Uitterlinden, A. G. (Contributor), Beekman, M. (Contributor), Jhamai, P. M. (Contributor), Moed, M. (Contributor), Luijk, R. (Contributor), van Meurs, J. (Contributor), Arindrarto, W. (Contributor), van Zwet, E. W. (Contributor), Jansen, R. (Contributor), Swertz, M. (Contributor), van 't Hof, P. (Contributor), van Rooij, J. (Contributor), van Dongen, J. (Contributor), van den Berg, L. H. (Contributor), Veldink, J. H. (Contributor), Eline Slagboom (Contributor), van Greevenbroek, M. M. J. (Contributor), Deelen, P. (Contributor), Suchiman, H. E. D. (Contributor), van Iterson, M. (Contributor), van der Kallen, C. J. H. (Contributor), Hottenga, J. J. (Contributor), Pool, R. (Contributor) & van Galen, M. (Contributor), University of Groningen, 28-Jan-2017
DOI: 10.6084/m9.figshare.c.3676579_d7.v1, https://doi.org/10.6084%2Fm9.figshare.c.3676579_d7.v1
Dataset
Additional file 5 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
Wijmenga, C. (Contributor), Verbiest, M. (Contributor), Hofman, B. A. (Contributor), Vermaat, M. (Contributor), Nooren, I. (Contributor), Mei, H. (Contributor), Eline Slagboom (Contributor), van Iterson, M. (Contributor), Veldink, J. H. (Contributor), van Galen, M. (Contributor), van 't Hof, P. (Contributor), van Meurs, J. (Contributor), 't Hoen, P. (Contributor), van Heemst, D. (Contributor), Franke, L. (Contributor), Zhernakova, S. (Contributor), Moed, M. (Contributor), Verkerk, M. (Contributor), Pool, R. (Contributor), Beekman, M. (Contributor), van Dijk, F. (Contributor), van den Berg, L. H. (Contributor), Zhernakova, D. (Contributor), Bot, J. (Contributor), Hottenga, J. J. (Contributor), Lakenberg, N. (Contributor), van der Breggen, R. (Contributor), van der Kallen, C. J. H. (Contributor), Bonder, M. J. (Contributor), Deelen, P. (Contributor), Jansen, R. (Contributor), Schalkwijk, C. G. (Contributor), Jhamai, P. M. (Contributor), Swertz, M. (Contributor), Tigchelaar - Feenstra, E. (Contributor), Isaacs, A. (Contributor), Kielbasa, S. M. (Contributor), Luijk, R. (Contributor), Uitterlinden, A. G. (Contributor), van Dongen, J. (Contributor), van Greevenbroek, M. M. J. (Contributor), Arindrarto, W. (Contributor), van Rooij, J. (Contributor), Heijmans, B. T. (Contributor), Stehouwer, C. D. A. (Contributor), van Zwet, E. W. (Contributor), 't Hoen, P. A. C. (Contributor), Suchiman, H. E. D. (Contributor), Deelen, J. (Contributor), van Duijn, C. M. (Contributor) & Boomsma, D. I. (Contributor), University of Groningen, 28-Jan-2017
DOI: 10.6084/m9.figshare.c.3676579_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3676579_d1.v1
Dataset

Freerk van Dijk

Network

Dive into details

Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS

Posttranscriptional Regulation of the Human LDL Receptor by the U2-Spliceosome

Feasibility of predicting allele specific expression from DNA sequencing using machine learning

A characterization of cis- and trans-heritability of RNA-Seq-based gene expression

A common variant in CCDC93 protects against myocardial infarction and cardiovascular mortality by regulating endosomal trafficking of low-density lipoprotein receptor

Additional file 7 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution

Additional file 3 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution

Additional file 4 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution

Additional file 6 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution

Additional file 5 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution

Freerk van Dijk

Network

Research output

Datasets