Lude Franke

237 Article
26 Meeting Abstract
14 Letter
4 Review article
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Author Correction: Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology (vol 53, pg 1636, 2021)
SLALOM Consortium, PARALS Consortium, SLAGEN Consortium, SLAP Consortium, van Rheenen, W., van der Spek, R. A. A., Bakker, M. K., van Vugt, J. J. F. A., Hop, P. J., Zwamborn, R. A. J., de Klein, N., Westra, H-J., Bakker, O. B., Deelen, P., Shireby, G., Hannon, E., Moisse, M., Baird, D., Restuadi, R., Dolzhenko, E. & 34 others, Dekker, A. M., Gawor, K., Westeneng, H-J., Tazelaar, G. H. P., van Eijk, K. R., Kooyman, M., Byrne, R. P., Doherty, M., Heverin, M., Al Khleifat, A., Iacoangeli, A., Shatunov, A., Ticozzi, N., Cooper-Knock, J., Smith, B. N., Gromicho, M., Chandran, S., Pal, S., Morrison, K. E., Shaw, P. J., Hardy, J., Orrell, R. W., Sendtner, M., Meyer, T., Basak, N., van der Kooi, A. J., Ratti, A., Fogh, I., Gellera, C., Lauria, G., Corti, S., Kraft, J., Franke, L. & Veldink, J. H., Mar-2022, In: Nature genetics. 54, 3, p. 361-361 1 p.
Research output: Contribution to journal › Article › Academic › peer-review

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Functional genomics analysis identifies T and NK cell activation as a driver of epigenetic clock progression
BIOS Consortium, Dec-2022, In: Genome Biology. 23, 1, p. 24
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
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2 Citations (Scopus)

13 Downloads (Pure)
Genetic, parental and lifestyle factors influence telomere length
Andreu-Sánchez, S., Aubert, G., Ripoll-Cladellas, A., Henkelman, S., Zhernakova, D. V., Sinha, T., Kurilshikov, A., Cenit, M. C., Jan Bonder, M., Franke, L., Wijmenga, C., Fu, J., van der Wijst, M. G. P., Melé, M., Lansdorp, P. & Zhernakova, A., 9-Jun-2022, (E-pub ahead of print) In: Communications biology. 5, 1, 13 p., 565.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
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Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS
BIOS Consortium, Brain MEND Consortium, Hop, P. J., Zwamborn, R. A. J., Hannon, E., Shireby, G. L., Nabais, M. F., Walker, E. M., van Rheenen, W., van Vugt, J. J. F. A., Dekker, A. M., Westeneng, H. J., Tazelaar, G. H. P., van Eijk, K. R., Moisse, M., Baird, D., Al Khleifat, A., Iacoangeli, A., Ticozzi, N., Ratti, A. & 25 others, Cooper-Knock, J., Morrison, K. E., Shaw, P. J., Basak, A. N., Chiò, A., Calvo, A., Moglia, C., Canosa, A., Brunetti, M., Grassano, M., Gotkine, M., Lerner, Y., Zabari, M., Vourc'H, P., Corcia, P., Couratier, P., Mora Pardina, J. S., Salas, T., Dion, P., Ross, J. P., Henderson, R. D., Mathers, S., McCombe, P. A., Needham, M. & Veldink, J. H., 23-Feb-2022, In: Science Translational Medicine. 14, 633, 16 p., eabj0264.
Research output: Contribution to journal › Article › Academic › peer-review

1 Citation (Scopus)
Gut mucosa dissociation protocols influence cell type proportions and single-cell gene expression levels
Uniken Venema, W. T. C., Ramírez-Sánchez, A. D., Bigaeva, E., Withoff, S., Jonkers, I., McIntyre, R. E., Ghouraba, M., Raine, T., Weersma, R. K., Franke, L., Festen, E. A. M. & van der Wijst, M. G. P., 14-Jun-2022, In: Scientific Reports. 12, 14 p., 9897.
Research output: Contribution to journal › Article › Academic › peer-review

Open Access
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1 Other research activities
1 Professional or public event

Publiekslezing Corona: effect op het welbevinden van Noord-Nederland
Judith Rosmalen (Invited speaker) & Lude Franke (Invited speaker)
1-Mar-2022
Activity: Talk and presentation › Professional or public presentation › Popular
Ongoing collaboration: bioinformatics analysis of genomic instability
Marcel A. T. M. van Vlugt (Other), Lude Franke (Other) & Rudolf Fehrmann (Other)
2015 → …
Activity: Other › Other research activities › Academic

Data from: Large scale plasma metabolome analysis reveals alterations in HDL metabolism in migraine
Onderwater, G. L. J. (Creator), Ligthart, L. (Creator), Bot, M. (Creator), Demirkan, A. (Creator), Yang-Fu, J. (Creator), van der Kallen, C. J. H. (Creator), Vijfhuizen, L. S. (Creator), Pool, R. (Creator), Liu, J. (Creator), Vanmolkot, F. H. M. (Creator), Beekman, M. (Creator), Wen, K. (Creator), Amin, N. (Creator), Thesing, C. S. (Creator), Pijpers, J. A. (Creator), Kies, D. A. (Creator), Zielman, R. (Creator), Boer, de, I. (Creator), van Greevenbroek, M. M. J. (Creator), Arts, I. C. W. (Creator), Milaneschi, Y. (Creator), Schram, M. T. (Creator), Dagnelie, P. C. (Creator), Franke, L. (Contributor), Ikram, M. A. (Creator), Ferrari, M. D. (Creator), Goeman, J. (Creator), Slagboom, P. E. (Creator), Wijmenga, C. (Contributor), Stehouwer, C. D. A. (Creator), Boomsma, D. (Creator), Duijn, C. M. V. (Creator), Penninx, B. W. (Creator), 't Hoen, P. A. C. (Creator), Terwindt, G. M. (Creator) & van den Maagdenberg, A. M. J. M. (Creator), Dryad Digital Repository, 3-Apr-2019
DOI: 10.5061/dryad.p698mn7, http://(bbmri.researchlumc.nl/ atlas
Dataset
Additional file 1: Table S1. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing
van der Velde, J. (Contributor), de Boer, E. N. (Contributor), van Diemen, C. (Contributor), Raddatz, B. (Contributor), Abbott, K. (Contributor), Knopperts, A. (Contributor), Franke, L. (Contributor), Sijmons, R. (Contributor), de Koning, T. (Contributor), Wijmenga, C. (Contributor), Sinke, R. (Contributor) & Swertz, M. (Contributor), University of Groningen, 16-Jan-2017
DOI: 10.6084/m9.figshare.c.3666643_d4.v1
Dataset
Additional file 3: Table S3. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing
van der Velde, J. (Contributor), de Boer, E. (Contributor), van Diemen, C. (Contributor), Raddatz, B. (Contributor), Abbott, K. (Contributor), Knopperts, A. (Contributor), Franke, L. (Contributor), Sijmons, R. (Contributor), de Koning, T. (Contributor), Wijmenga, C. (Contributor), Sinke, R. (Contributor) & Swertz, M. (Contributor), University of Groningen, 16-Jan-2017
DOI: 10.6084/m9.figshare.c.3666643_d3.v1
Dataset
Data from: Mediation analysis demonstrates that trans-eQTLs are often explained by cis-mediation: a genome-wide analysis among 1,800 South Asians
Pierce, B. L. (Creator), Tong, L. (Creator), Chen, L. S. (Creator), Rahaman, R. (Creator), Argos, M. (Creator), Jasmine, F. (Creator), Roy, S. (Creator), Paul-Brutus, R. (Creator), Westra, H. J. (Creator), Franke, L. (Creator), Esko, T. (Creator), Zaman, R. (Creator), Islam, T. (Creator), Rahman, M. (Creator), Baron, J. A. (Creator), Kibriya, M. G. (Creator) & Ahsan, H. (Creator), University of Groningen, 12-Dec-2014
DOI: 10.5061/dryad.tp097
Dataset
Additional file 17 of Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease
Chu, X. (Contributor), Aguirre Gamboa, R. (Contributor), Koenen, H. J. P. M. (Contributor), de Bree, C. (Contributor), Franke, L. (Contributor), Magadi Gopalaiah, V. K. (Contributor), Bakker, O. (Contributor), Xu, C. (Contributor), Jonkers, I. (Contributor), Jansen, T. (Contributor), Withoff, S. (Contributor), Najhawan, M. (Contributor), Oosting, M. (Contributor), Jain, M. (Contributor), Mourits, V. P. (Contributor), Dao, K. (Contributor), Smeekens, S. P. (Contributor), Li, Y. (Contributor), Watrous, J. D. (Contributor), Clevers, H. (Contributor), Jaeger, M. (Contributor), Mathews, I. T. (Contributor), Joosten, I. (Contributor), Koeken, V. A. C. M. (Contributor), Xavier, R. J. (Contributor), Sharma, S. (Contributor), Netea, M. G. (Contributor), Beumer, J. (Contributor), Wijmenga, C. (Contributor), Joosten, L. A. B. (Contributor), Moorlag, S. (Contributor), Netea-Maier, R. T. (Contributor) & Sanna, S. (Contributor), figshare Academic Research System, 7-Jul-2021
DOI: 10.6084/m9.figshare.14921200.v1
Dataset

Corona als bron van ellende én van wetenschappelijke inzichten | Medische Publieksacademie UMCG
Lude Franke
27/02/2022
1 Media contribution
Press/Media: Expert Comment › Popular
Bron van ellende en wetenschap
Judith Rosmalen & Lude Franke
26/02/2022
1 Media contribution
Press/Media: Public Engagement Activities › Popular
Twee RUG-onderzoekers benoemd bij Koninklijke Hollandsche Maatschappij der Wetenschappen
Lude Franke & Nancy Kamp-Roelands
15/02/2022
1 Media contribution
Press/Media: Public Engagement Activities › Popular
Functional genomics analysis identifies T and NK cell activation as a driver of epigenetic clock progression - Genome Biology
Lude Franke
14/01/2022
1 item of Media coverage
Press/Media: Research › Professional
17% van niet-gevaccineerden vreest voor eigen risico zorgkosten
Lude Franke
15/11/2021
1 item of Media coverage
Press/Media: Expert Comment › Popular

Highly Cited Researcher
Sanna, Serena (Recipient), Wijmenga, Cisca (Recipient) & Franke, Lude (Recipient), 2018
Prize: National/international honour › Academic

Lude Franke

Network

Dive into details

Author Correction: Common and rare variant association analyses in amyotrophic lateral sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology (vol 53, pg 1636, 2021)

Functional genomics analysis identifies T and NK cell activation as a driver of epigenetic clock progression

Genetic, parental and lifestyle factors influence telomere length

Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS

Gut mucosa dissociation protocols influence cell type proportions and single-cell gene expression levels

Publiekslezing Corona: effect op het welbevinden van Noord-Nederland

Ongoing collaboration: bioinformatics analysis of genomic instability

Data from: Large scale plasma metabolome analysis reveals alterations in HDL metabolism in migraine

Additional file 1: Table S1. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing

Additional file 3: Table S3. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing

Data from: Mediation analysis demonstrates that trans-eQTLs are often explained by cis-mediation: a genome-wide analysis among 1,800 South Asians

Additional file 17 of Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease

Corona als bron van ellende én van wetenschappelijke inzichten | Medische Publieksacademie UMCG

Bron van ellende en wetenschap

Twee RUG-onderzoekers benoemd bij Koninklijke Hollandsche Maatschappij der Wetenschappen

Functional genomics analysis identifies T and NK cell activation as a driver of epigenetic clock progression - Genome Biology

17% van niet-gevaccineerden vreest voor eigen risico zorgkosten

Highly Cited Researcher

Lude Franke

Network

Research output

Activities

Datasets

Press / Media

Prizes