Research output per year
Research output per year
- 1 - 50 out of 52 results
Search results
-
2025
A comparison of an integrated and image-only deep learning model for predicting the disappearance of indeterminate pulmonary nodules
Wang, J., Cai, J., Tang, W., Dudurych, I., van Tuinen, M., Vliegenthart, R. & van Ooijen, P., Jul-2025, In: Computerized medical imaging and graphics. 123, 13 p., 102553.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile2 Downloads (Pure) -
CT-based airway changes after smoking cessation in the general population
Dudurych, I., Sidorenkov, G., van Tuinen, M., Slebos, D. J., de Bock, G. H., van den Berge, M., de Bruijne, M. & Vliegenthart, R., Feb-2025, In: European Journal of Radiology. 183, 7 p., 111905.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile20 Downloads (Pure) -
Repeatability of AI-based, automatic measurement of vertebral and cardiovascular imaging biomarkers in low-dose chest CT: the ImaLife cohort
Hamelink, I., van Tuinen, M., Kwee, T. C., van Ooijen, P. M. A. & Vliegenthart, R., 8-Jan-2025, (E-pub ahead of print) In: European Radiology. 9 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile1 Downloads (Pure) -
2024
Correction: Effect of emphysema on AI software and human reader performance in lung nodule detection from low-dose chest CT (European Radiology Experimental, (2024), 8, 1, (63), 10.1186/s41747-024-00459-9)
Sourlos, N., Pelgrim, G. J., Wisselink, H. J., Yang, X., de Jonge, G., Rook, M., Prokop, M., Sidorenkov, G., van Tuinen, M., Vliegenthart, R. & van Ooijen, P. M. A., 16-Aug-2024, In: European Radiology Experimental. 8, 1, 1 p., 94.Research output: Contribution to journal › Erratum
Open AccessFile61 Downloads (Pure) -
Effect of emphysema on AI software and human reader performance in lung nodule detection from low-dose chest CT
Sourlos, N., Pelgrim, G., Wisselink, H. J., Yang, X., de Jonge, G., Rook, M., Prokop, M., Sidorenkov, G., van Tuinen, M., Vliegenthart, R. & van Ooijen, P. M. A., 20-May-2024, In: European Radiology Experimental. 8, 11 p., 63.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile64 Downloads (Pure) -
Pathophysiological processes underlying hidden hearing loss revealed in Kcnt1/2 double knockout mice
Schubert, N. M. A., Reijntjes, D. O. J., van Tuinen, M., Vijayakumar, S., Jones, T. A., Jones, S. M. & Pyott, S. J., Sept-2024, In: Aging Cell. 23, 9, 15 p., e14243.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile1 Citation (Scopus)47 Downloads (Pure) -
2023
Functional, Morphological and Molecular Changes Reveal the Mechanisms Associated with Age-Related Vestibular Loss
Paplou, V. G., Schubert, N. M. A., van Tuinen, M., Vijayakumar, S. & Pyott, S. J., 21-Sept-2023, In: Biomolecules. 13, 9, 20 p., 1429.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile2 Citations (Scopus)83 Downloads (Pure) -
2022
Transcriptome-Guided Identification of Drugs for Repurposing to Treat Age-Related Hearing Loss
Schubert, N. M. A., van Tuinen, M. & Pyott, S. J., 2022, In: Biomolecules. 12, 4, 19 p., 498.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile12 Citations (Scopus)114 Downloads (Pure) -
2020
Functional, Morphological, and Evolutionary Characterization of Hearing in Subterranean, Eusocial African Mole-Rats
Pyott, S. J., van Tuinen, M., Screven, L. A., Schrode, K. M., Bai, J.-P., Barone, C. M., Price, S. D., Lysakowski, A., Sanderford, M., Kumar, S., Santos-Sacchi, J., Lauer, A. M. & Park, T. J., 16-Nov-2020, In: Current Biology. 30, 22, p. 4329-4341.e4 17 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile17 Citations (Scopus)65 Downloads (Pure) -
Tempo and Pattern of Avian Brain Size Evolution
Ksepka, D. T., Balanoff, A. M., Smith, N. A., Bever, G. S., Bhullar, B.-A. S., Bourdon, E., Braun, E. L., Burleigh, J. G., Clarke, J. A., Colbert, M. W., Corfield, J. R., Degrange, F. J., De Pietri, V. L., Early, C. M., Field, D. J., Gignac, P. M., Gold, M. E. L., Kimball, R. T., Kawabe, S. & Lefebvre, L. & 17 others, , 8-Jun-2020, In: Current Biology. 30, 11, p. 2026-2036.e3 14 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile89 Citations (Scopus)134 Downloads (Pure) -
2019
Sodium-activated potassium channels shape peripheral auditory function and activity of the primary auditory neurons in mice
Reijntjes, D. O. J., Lee, J. H., Park, S., Schubert, N. M. A., van Tuinen, M., Vijayakumar, S., Jones, T. A., Jones, S. M., Gratton, M. A., Xia, X.-M., Yamoah, E. N. & Pyott, S. J., 22-Feb-2019, In: Scientific Reports. 9, 18 p., 2573.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile30 Citations (Scopus)308 Downloads (Pure) -
2018
Whole-genome resequencing reveals signatures of selection and timing of duck domestication
Zhang, Z., Jia, Y., Almeida, P., Mank, J. E., van Tuinen, M., Wang, Q., Jiang, Z., Chen, Y., Zhan, K. & Hou, S., Apr-2018, In: Gigascience. 7, 4, 12 p., giy027.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile87 Citations (Scopus)101 Downloads (Pure) -
2017
Erratum: Opposing demographic histories reveal rapid evolution in grebes (Aves: Podicipedidae) (vol 4, pg 771, 2015)
Ogawa, L. M., Pulgarin, P. C., Vance, D. A., Fjeldsa, J. & van Tuinen, M., 1-Jul-2017, In: The Auk. 134, 3, p. 627-627 1 p.Research output: Contribution to journal › Erratum
-
2015
Isolation and characterization of microsatellite DNA loci in the threatened flat-spired three-toothed land snail Triodopsis platysayoides
King, T. L., Eackles, M. S., Garner, B., van Tuinen, M. & Arbogast, B. S., 2015, In: Conservation genetics resources. 7, 3, p. 767-769 3 p.Research output: Contribution to journal › Article › Academic › peer-review
-
Potential for bias and low precision in molecular divergence time estimation of the Canopy of Life: An example from aquatic bird families
van Tuinen, M. & Torres, C. R., 8-Jun-2015, In: Frontiers in Genetics. 6, 11 p., 203.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile22 Citations (Scopus)277 Downloads (Pure) -
Rhetoric vs. reality: A commentary on "Bird Origins Anew" by A. Feduccia
Smith, N. A., Chiappe, L. M., Clarke, J. A., Edwards, S. V., Nesbitt, S. J., Norell, M. A., Stidham, T. A., Turner, A., van Tuinen, M., Vinther, J. & Xu, X., Apr-2015, In: The Auk. 132, 2, p. 467-480 14 p.Research output: Contribution to journal › Editorial › Academic › peer-review
14 Citations (Scopus) -
2014
A multi-locus inference of the evolutionary diversification of extant flamingos (Phoenicopteridae)
Torres, C. R., Ogawa, L. M., Gillingham, M. A. F., Ferrari, B. & van Tuinen, M., 1-Mar-2014, In: BMC Evolutionary Biology. 14, p. 36 9 p., 36.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile32 Citations (Scopus)42 Downloads (Pure) -
2013
Mitochondrial DNA analysis reveals substantial population structure within the endangered Black-capped Petrel (Pterodroma hasitata)
Manly, B., Arbogast, B. S., Lee, D. S. & Van Tuinen, M., 2013, In: Waterbirds. 36, 2, p. 228-233 6 p.Research output: Contribution to journal › Article › Academic › peer-review
5 Citations (Scopus) -
2012
Best practices for justifying fossil calibrations
Parham, J. F., Donoghue, P. C., Bell, C. J., Calway, T. D., Head, J. J., Holroyd, P. A., Inoue, J. G., Irmis, R. B., Joyce, W. G., Ksepka, D. T. & van Tuinen, M., 21-Sept-2012, In: Systematic biology. 61, 2, p. 346-359 14 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile567 Citations (Scopus)34 Downloads (Pure) -
Genome skimming identifies polymorphism in tern populations and species
Jackson, D. G., Emslie, S. D. & Van Tuinen, M., 2012, In: BMC Research Notes. 5, 1, 11 p., 94.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile7 Citations (Scopus)34 Downloads (Pure) -
The fossil calibration database: a new bioinformatic tool for dating divergences of extant lineages by synthesizing paleontological and molecular sequence data
Parham, J. F., Ksepka, D. T., Polly, P., Van Tuinen, M. & Benton, M. J., 2012, Journal of Vertebrate Paleontology. Vol. 32. p. 154-154 1 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic
-
2011
Evolving Perceptions on the Antiquity of the Modern Avian Tree
Brown, J. W. & Van Tuinen, M., 2011, Living Dinosaurs: the Evolutionary History of Modern Birds. Wiley, p. 306-324 19 p. (Living dinosaurs: the evolutionary history of modern birds).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic › peer-review
27 Citations (Scopus) -
Late Holocene occupation of Gentoo Penguins (Pygoscelis papua) on Byers Peninsula, Livingston Island, Antarctica
Emslie, S. D., Baumann, K. & van Tuinen, M., 2011, In: Polar Biology. 34, 2, p. 283-290 8 p.Research output: Contribution to journal › Article › Academic › peer-review
19 Citations (Scopus) -
Synthesizing and databasing fossil calibrations: divergence dating and beyond
Ksepka, D. T., Benton, M. J., Carrano, M. T., Gandolfo, M. A., Head, J. J., Hermsen, E. J., Joyce, W. G., Lamm, K. S., Patané, J. S., Phillips, M. J. & van Tuinen, M., 27-Apr-2011, In: Biology Letters. p. 801-803 3 p.Research output: Contribution to journal › Meeting Abstract › Academic
22 Citations (Scopus) -
2010
Dispersal provided resilience to range collapse in a marine mammal: insights from the past to inform conservation biology
Pinsky, M., Newsome, S., Dickerson, B., Fang, Y., Van Tuinen, M., Kennett, D. J., Ream, R. & Hadly, E., 2010, In: Molecular Ecology. 19, 12, p. 2418-2429 12 p.Research output: Contribution to journal › Article › Academic › peer-review
37 Citations (Scopus) -
2009
Advanced birds (Neoaves)
van Tuinen, M., 2009, The Timetree of Life. Blair Hedges, S. & Kumar, S. (eds.). Oxford University Press, p. 419-422 4 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic
-
Birds (Aves)
van Tuinen, M., 2009, Oxford Univ. Press, New York.Research output: Other contribution › Academic
-
Phylogeography of Microtus longicaudus in the tectonically and glacially dynamic central Rocky Mountains
Spaeth, P., Van Tuinen, M., Chan, Y., Terca, D. & Hadly, E., 2009, In: Journal of Mammalogy. 90, 3, p. 571-584 14 p.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile18 Citations (Scopus)49 Downloads (Pure) -
Source--sink dynamics structure a common montane mammal
O’KEEFE, K., Ramakrishnan, U., Van Tuinen, M. & Hadly, E. A., 2009, In: Molecular Ecology. 18, 23, p. 4775-4789 15 p.Research output: Contribution to journal › Article › Academic › peer-review
13 Citations (Scopus) -
2008
Fire and ice: genetic structure of the Uinta ground squirrel (Spermophilus armatus) across the Yellowstone hotspot
Van Tuinen, M., O’KEEFE, K., Ramakrishnan, U. & Hadly, E. A., 2008, In: Molecular Ecology. 17, 7, p. 1776-1788 13 p.Research output: Contribution to journal › Article › Academic › peer-review
12 Citations (Scopus) -
2007
Insertion events of CR1 retrotransposable elements elucidate the phylogenetic branching order in galliform birds
Kaiser, V. B., van Tuinen, M. & Ellegren, H., 2007, In: Molecular Biology and Evolution. 24, 1, p. 338-347 10 p.Research output: Contribution to journal › Article › Academic › peer-review
62 Citations (Scopus) -
The shifting baseline of northern fur seal ecology in the northeast Pacific Ocean
Newsome, S. D., Etnier, M. A., Gifford-Gonzalez, D., Phillips, D. L., Van Tuinen, M., Hadly, E. A., Costa, D. P., Kennett, D. J., Guilderson, T. P. & Koch, P. L., 2007, In: Proceedings of the National Academy of Sciences. 104, 23, p. 9709-9714 6 p.Research output: Contribution to journal › Article › Academic › peer-review
107 Citations (Scopus) -
2006
Constraining fossil calibrations for molecular clocks
Hedges, S. B., Kumar, S. & Van Tuinen, M., 2006, In: BioEssays. 28, 770-771Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review
10 Citations (Scopus) -
Mode and tempo of evolution in aquatic birds inferred from Bayesian clocks and total evidence phylogenetics
van Tuinen, M., Aug-2006, In: Journal of Ornithology. 147, p. 43-43 1 p.Research output: Contribution to journal › Meeting Abstract › Academic
-
Tempo and mode of modern bird evolution observed with large-scale taxonomic sampling
Van Tuinen, M., Stidham, T. & Hadly, E., 2006, In: Historical Biology. 18, 2, p. 209-225 17 p.Research output: Contribution to journal › Article › Academic › peer-review
31 Citations (Scopus) -
2005
A new specimen of the fossil palaeognath Lithornis from the Lower Eocene of Denmark
Leonard, L., Dyke, G. J. & Van Tuinen, M., 2005, In: American Museum Novitates. 2005, 3491, p. 1-11 11 p.Research output: Contribution to journal › Article › Academic › peer-review
37 Citations (Scopus) -
USING AN EXCEPTIONAL FOSSIL RECORD TO TEST AND CALIBRATE RODENT MOLECULAR CLOCKS
Van Tuinen, M., Conroy, C., Bell, C. & Hadly, E., 2005, In: Journal of vertebrate paleontology. 25, p. 126A-126A 1 p.Research output: Contribution to journal › Meeting Abstract › Academic
-
2004
Avian molecular systematics on the rebound: a fresh look at modern shorebird phylogenetic relationships
Van Tuinen, M., Waterhouse, D. & J. Dyke, G., 2004, In: Journal of Avian Biology. 35, 3, p. 191-194 4 p.Research output: Contribution to journal › Article › Academic › peer-review
26 Citations (Scopus) -
Calibration of galliform molecular clocks using multiple fossils and genetic partitions
van Tuinen, M. & Dyke, G. J., 2004, In: Molecular Phylogenetics and Evolution. 30, 1, p. 74-86 13 p.Research output: Contribution to journal › Article › Academic › peer-review
100 Citations (Scopus) -
Error in estimation of rate and time inferred from the early amniote fossil record and avian molecular clocks
van Tuinen, M. & Hadly, E. A., 2004, In: Journal of Molecular Evolution. 59, 2, p. 267-276 10 p.Research output: Contribution to journal › Article › Academic › peer-review
46 Citations (Scopus) -
Genetic response to climatic change: insights from ancient DNA and phylochronology
Hadly, E. A., Ramakrishnan, U., Chan, Y. L., van Tuinen, M., O'Keefe, K., Spaeth, P. A. & Conroy, C. J., 2004, In: PLoS Biology. 2, 10, e290.Research output: Contribution to journal › Article › Academic › peer-review
Open AccessFile118 Citations (Scopus)45 Downloads (Pure) -
Studying the effect of environmental change on biotic evolution: past genetic contributions, current work and future directions
van Tuinen, M., Ramakrishnan, U. & Hadly, E. A., 14-Sept-2004, In: Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences. 362, 1825, p. 2795-2820 26 p.Research output: Contribution to journal › Article › Academic › peer-review
18 Citations (Scopus) -
The effect of external and internal fossil calibrations on the avian evolutionary timescale
Tuinen, M. V. & Hedges, S. B., 2004, In: Journal of paleontology. 78, 1, p. 45-50 6 p.Research output: Contribution to journal › Article › Academic › peer-review
33 Citations (Scopus) -
The evolutionary radiation of modern birds (Neornithes): reconciling molecules, morphology and the fossil record
Dyke, G. J. & Van Tuinen, M., 2004, In: Zoological journal of the linnean society. 141, 2, p. 153-177 25 p.Research output: Contribution to journal › Article › Academic › peer-review
93 Citations (Scopus) -
2003
Ancient DNA evidence of prolonged population persistence with negligible genetic diversity in an endemic tuco-tuco (Ctenomys sociabilis)
Hadly, E. A., van Tuinen, M., Chan, Y. & Heiman, K., 2003, In: Journal of Mammalogy. 84, 2, p. 403-417 15 p.Research output: Contribution to journal › Article › Academic › peer-review
43 Citations (Scopus) -
'Big bang'for Tertiary birds? A reply
van Tuinen, M., Paton, T., Haddrath, O. & Baker, A., 2003, In: Trends in Ecology Evolution. 18, 9, p. 442-443 2 p.Research output: Contribution to journal › Comment/Letter to the editor › Academic › peer-review
-
Extracting time from phylogenies: positive interplay between fossil and genetic data
Conroy, C. J. & van Tuinen, M., 2003, In: Journal of Mammalogy. 84, 2, p. 444-455 12 p.Research output: Contribution to journal › Article › Academic › peer-review
39 Citations (Scopus) -
2001
Calibration of avian molecular clocks
van Tuinen, M. & Hedges, S. B., 2001, In: Molecular Biology and Evolution. 18, 2, p. 206-213 8 p.Research output: Contribution to journal › Article › Academic › peer-review
221 Citations (Scopus) -
Convergence and divergence in the evolution of aquatic birds
Tuinenf, M. V., Butvill, D. B., Kirsch, J. A. & Hedges, S. B., 2001, In: Proceedings of the Royal Society B. 268, 1474, p. 1345-1350 6 p.Research output: Contribution to journal › Article › Academic › peer-review
119 Citations (Scopus) -
Relationships of birds--molecules versus morphology
Torres, C. & van Tuinen, M., 2001, eLS. Wiley, (e LS).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Academic