Roel Bovenberg

Search results

• 2021

  CRISPR-based transcriptional activation tool for silent genes in filamentous fungi

  Mózsik, L., Hoekzema, M., de Kok, N. A. W., Bovenberg, R. A. L., Nygård, Y. & Driessen, A. J. M., 13-Jan-2021, In: Scientific Reports. 11, 1, 13 p., 1118.

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  18 Citations (Scopus)

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• Identification of a conserved N-terminal domain in the first module of ACV synthetases

  Iacovelli, R., Mózsik, L., Bovenberg, R. A. L. & Driessen, A. J. M., Feb-2021, In: MicrobiologyOpen. 10, 1, 16 p., e1145.

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  5 Citations (Scopus)

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• Modular Synthetic Biology Toolkit for Filamentous Fungi

  Mózsik, L., Pohl, C., Meyer, V., Bovenberg, R. A. L., Nygård, Y. & Driessen, A. J. M., 19-Nov-2021, In: ACS Synthetic Biology. 10, 11, p. 2850–2861 12 p.

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  24 Citations (Scopus)

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• Nonribosomal peptide synthetases and their biotechnological potential in Penicillium rubens

  Iacovelli, R., Bovenberg, R. A. L. & Driessen, A. J. M., Oct-2021, In: Journal of Industrial Microbiology & Biotechnology. 48, 7-8, 30 p., kuab045.

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  10 Citations (Scopus)

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• 2020

  A Penicillium rubens platform strain for secondary metabolite production

  Pohl, C., Polli, F., Schütze, T., Viggiano, A., Mózsik, L., Jung, S., de Vries, M., Bovenberg, R. A. L., Meyer, V. & Driessen, A. J. M., 1-Dec-2020, In: Scientific Reports. 10, 1, 16 p., 7630.

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  22 Citations (Scopus)

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• Biochemical characterization of the Nocardia lactamdurans ACV synthetase

  Iacovelli, R., Zwahlen, R. D., Bovenberg, R. A. L. & Driessen, A. J. M., Apr-2020, In: PLoS ONE. 15, 4, 16 p., e0231290.

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  3 Citations (Scopus)

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• Impact of classical strain improvement of penicillium rubens on amino acid metabolism during β-Lactam production

  Wu, M., Crismaru, C. G., Salo, O., Bovenberg, R. A. L. & Driessen, A. J. M., 1-Feb-2020, In: Applied and environmental microbiology. 86, 3, 14 p., e01561.

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  8 Citations (Scopus)

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• 2019

  Bacterial MbtH-like proteins stimulate nonribosomal peptide synthetase-derived secondary metabolism in the filamentous fungi

  Zwahlen, R., Pohl, C., Bovenberg, R. A. L. & Driessen, A. J. M., Sept-2019, In: ACS Synthetic Biology. 8, 8, p. 1776-1787 12 p.

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  5 Citations (Scopus)

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• Synthetic control devices for gene regulation in Penicillium chrysogenum

  Mózsik, L., Büttel, Z., Bovenberg, R. A. L., Driessen, A. J. M. & Nygård, Y., 18-Nov-2019, In: Microbial Cell Factories. 18, 1, 13 p., 203.

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  13 Citations (Scopus)

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• 2018

  Deregulation of secondary metabolism in a histone deacetylase mutant of Penicillium chrysogenum

  Guzman-Chavez, F., Salo, O., Samol, M., Ries, M., Kuipers, J., Bovenberg, R. A. L., Vreeken, R. J. & Driessen, A. J. M., Oct-2018, In: MicrobiologyOpen. 7, 5, 15 p., e00598.

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  18 Citations (Scopus)

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• Pathway for the Biosynthesis of the Pigment Chrysogine by Penicillium chrysogenum

  Viggiano, A., Salo, O., Ali, H., Szymanski, W., Lankhorst, P. P., Nygård, Y., Bovenberg, R. A. L. & Driessen, A. J. M., Feb-2018, In: Applied and environmental microbiology. 84, 4, 11 p., e02246-17.

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  21 Citations (Scopus)

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• 2017

  Mechanism and regulation of sorbicillin biosynthesis by Penicillium chrysogenum

  Guzmán-Chávez, F., Salo, O., Nygård, Y., Lankhorst, P. P., Bovenberg, R. A. L. & Driessen, A. J. M., Jul-2017, In: Microbial Biotechnology. 10, 4, p. 958-968 11 p.

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  36 Citations (Scopus)

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• 2016

  A Minimal Model of Ribosome Allocation Dynamics Captures Trade-offs in Expression between Endogenous and Synthetic Genes

  Gorochowski, T. E., Avcilar-Kucukgoze, I., Bovenberg, R. A. L., Roubos, J. A. & Ignatova, Z., 25-Apr-2016, In: ACS Synthetic Biology. 5, 7, p. 710-720 11 p., 6b00040.

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  78 Citations (Scopus)

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• CRISPR/Cas9 based genome editing of Penicillium chrysogenum

  Pohl, C., Kiel, J. A. K. W., Driessen, A. J. M., Bovenberg, R. A. L. & Nygård, Y., 12-Apr-2016, In: ACS Synthetic Biology. 5, 7, p. 754-764 11 p., 6b00082.

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  236 Citations (Scopus)

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• Identification of a polyketide synthase involved in sorbicillin biosynthesis by Penicillium chrysogenum

  Salo, O., Guzmán-Chávez, F., Ries, M. I., Lankhorst, P. P., Bovenberg, R. A. L., Vreeken, R. J. & Driessen, A. J. M., 22-Apr-2016, In: Applied and environmental microbiology. 82, 13, p. 3971-3978 8 p., 00350-00316.

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• Metabolic Engineering toward Sustainable Production of Nylon-6

  Turk, S. C. H. J., Kloosterman, W. P., Ninaber, D. K., Kolen, K. P. A. M., Knutova, J., Suir, E., Schurmann, M., Raemakers-Franken, P. C., Muller, M., de Wildeman, S. M. A., Raamsdonk, L. M., van der Pol, R., Wu, L., Temudo, M. F., van der Hoeven, R. A. M., Akeroyd, M., van der Stoel, R. E., Noorman, H. J., Bovenberg, R. A. L. & Trefzer, A. C., Jan-2016, In: ACS Synthetic Biology. 5, 1, p. 65-73 9 p.

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• New promoters for strain engineering of Penicillium chrysogenum

  Polli, F., Meijrink, B., Bovenberg, R. A. L. & Driessen, A. J. M., 1-Apr-2016, In: Fungal Genetics and Biology. 89, p. 62-71 10 p.

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• 2015

  Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor

  Zhou, H., Vonk, B., Roubos, J. A., Bovenberg, R. A. L. & Voigt, C. A., 2015, In: Nucleic Acids Research.

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• A Mutasynthesis Approach with a Penicillium chrysogenum ΔroqA Strain Yields New Roquefortine D Analogues

  Ouchaou, K., Maire, F., Salo, O., Ali, H., Hankemeier, T., van der Marel, G. A., Filippov, D. V., Bovenberg, R. A. L., Vreeken, R. J., Driessen, A. J. M. & Overkleeft, H. S., 12-Mar-2015, In: ChemBioChem. 16, p. 915-923 9 p.

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  8 Citations (Scopus)

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• Functional exchangeability of oxidase and dehydrogenase reactions in the biosynthesis of hydroxyphenylglycine, a non-ribosomal peptide building block

  Diez, V., Loznik, M., Taylor, S., Winn, M., Rattray, N. J. W., Podmore, H., Micklefield, J., Goodacre, R., Medema, M. H., Müller, U., Bovenberg, R. A. L., Janssen, D. B. & Takano, E., 25-Feb-2015, In: ACS Synthetic Biology. 4, 7, p. 796-807 12 p.

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• Genomic mutational analysis of the impact of the classical strain improvement program on β-lactam producing Penicillium chrysogenum

  Salo, O. V., Ries, M., Medema, M. H., Lankhorst, P. P., Vreeken, R. J., Bovenberg, R. A. L. & Driessen, A. J. M., 18-Nov-2015, In: BMC Genomics. 16, 1, 15 p., 937.

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• 2014

  A Non-Canonical NRPS Is Involved in the Synthesis of Fungisporin and Related Hydrophobic Cyclic Tetrapeptides in Penicillium chrysogenum

  Ali, H., Ries, M. I., Lankhorst, P. P., van der Hoeven, R. A. M., Schouten, O. L., Noga, M., Hankemeier, T., van Peij, N. N. M. E., Bovenberg, R. A. L., Vreeken, R. J. & Driessen, A. J. M., 2-Jun-2014, In: PLoS ONE. 9, 6, 10 p., e98212.

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  36 Citations (Scopus)

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• Using Synthetic Biological Parts and Microbioreactors to Explore the Protein Expression Characteristics of Escherichia coli

  Gorochowski, T. E., van den Berg, E., Kerkman, R., Roubos, J. A. & Bovenberg, R. A. L., Mar-2014, In: ACS Synthetic Biology. 3, 3, p. 129-139 11 p.

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• 2013

  A Branched Biosynthetic Pathway Is Involved in Production of Roquefortine and Related Compounds in Penicillium chrysogenum

  Ali, H., Ries, M. I., Nijland, J. G., Lankhorst, P. P., Hankemeier, T., Bovenberg, R. A. L., Vreeken, R. J. & Driessen, A. J. M., 12-Jun-2013, In: PLoS ONE. 8, 6, 12 p., e65328.

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• Novel Key Metabolites Reveal Further Branching of the Roquefortine/Meleagrin Biosynthetic Pathway

  Ries, M. I., Ali, H., Lankhorst, P. P., Hankemeier, T., Bovenberg, R. A. L., Driessen, A. J. M. & Vreeken, R. J., 2013, In: J. Biol. Chem.. 288, 52, p. 37289-37295 7 p.

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• 2012

  A turning point for natural product discovery - ESF-EMBO research conference: synthetic biology of antibiotic production

  Takano, E., Bovenberg, R. A. L. & Breitling, R., Mar-2012, In: Molecular Microbiology. 83, 5, p. 884-893 10 p.

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  4 Citations (Scopus)

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• Genetic Circuit Performance under Conditions Relevant for Industrial Bioreactors

  Moser, F., Broers, N. J., Hartmans, S., Tamsir, A., Kerkman, R., Roubos, J. A., Bovenberg, R. & Voigt, C. A., Nov-2012, In: ACS Synthetic Biology. 1, 11, p. 555-564 10 p.

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  77 Citations (Scopus)

• Impact of Velvet Complex on Transcriptome and Penicillin G Production in Glucose-Limited Chemostat Cultures of a beta-Lactam High-Producing Penicillium chrysogenum Strain

  Veiga, T., Nijland, J. G., Driessen, A. J. M., Bovenberg, R. A. L., Touw, H., van den Berg, M. A., Pronk, J. T., Daran, J-M. & Veiga, T., Jun-2012, In: OMICS: A Journal of Integrative Biology. 16, 6, p. 320-333 14 p.

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  19 Citations (Scopus)

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• Increased Penicillin Production in Penicillium chrysogenum Production Strains via Balanced Overexpression of Isopenicillin N Acyltransferase

  Weber, S. S., Polli, F., Boer, R., Bovenberg, R. A. L. & Driessen, A. J. M., Oct-2012, In: Applied and environmental microbiology. 78, 19, p. 7107-7113 7 p.

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• Metabolic engineering of beta-oxidation in Penicillium chrysogenum for improved semi-synthetic cephalosporin biosynthesis

  Veiga, T., Gombert, A. K., Landes, N., Verhoeven, M. D., Kiel, J. A. K. W., Krikken, A. M., Nijland, J. G., Touw, H., Luttik, M. A. H., van der Toorn, J. C., Driessen, A. J. M., Bovenberg, R. A. L., van den Berg, M. A., van der Klei, I. J., Pronk, J. T. & Daran, J-M., Jul-2012, In: Metabolic Engineering. 14, 4, p. 437-448 12 p.

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• The ABC transporter ABC40 encodes a phenylacetic acid export system in Penicillium chrysogenum

  Weber, S. S., Kovalchuk, A., Bovenberg, R. A. L. & Driessen, A. J. M., Nov-2012, In: Fungal Genetics and Biology. 49, 11, p. 915-921 7 p.

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  14 Citations (Scopus)

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• 2011

  Aminoacyl-coenzyme A synthesis catalyzed by a CoA ligase from Penicillium chrysogenum

  Koetsier, M. J., Jekel, P. A., Wijma, H. J., Bovenberg, R. A. L. & Janssen, D. B., 23-Mar-2011, In: FEBS Letters. 585, 6, p. 893-898 6 p.

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  6 Citations (Scopus)

  39 Downloads (Pure)

• Autophagy Deficiency Promotes β-Lactam Production in Penicillium chrysogenum

  Bartosweska, M., Kiel, J. A. K. W., Bovenberg, R. A. L., Veenhuis, M. & van der Klei, I. J., Feb-2011, In: Applied and environmental microbiology. 77, 4, p. 1413-1422 10 p.

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  42 Citations (Scopus)

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• Degeneration of penicillin production in ethanol-limited chemostat cultivations of Penicillium chrysogenum: A systems biology approach

  Douma, R. D., Batista, J. M., Touw, K. M., Kiel, J. A. K. W., Zhao, Z., Veiga, T., Klaassen, P., Bovenberg, R. A. L., Daran, J-M., van Gulik, W. M., Heijnen, J. J. & Krikken, A., 19-Aug-2011, In: BMC Systems Biology. 5, 16 p., 132.

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• Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms

  Medema, M. H., Breitling, R., Bovenberg, R. & Takano, E., Feb-2011, In: Nature Reviews Microbiology. 9, 2, p. 131-137 7 p.

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  142 Citations (Scopus)

• Genome-wide gene expression changes in an industrial clavulanic acid overproduction strain of Streptomyces clavuligerus

  Medema, M. H., Alam, M. T., Heijne, W. H. M., Berg, M. A. V. D., Müller, U., Trefzer, A., Bovenberg, R. A. L., Breitling, R. & Takano, E., Mar-2011, In: Microbial Biotechnology. 4, 2, p. 300-305 6 p.

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• 2010

  Biosynthesis of active pharmaceuticals: β-lactam biosynthesis in filamentous fungi

  van den Berg, M. A., Gidijala, L., Kiel, J. A. K. W., Bovenberg, R. A. L. & van der Klei, I. J., 2010, In: Biotechnol Genet Eng Rev. 27, 1, p. 1-31 31 p.

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  14 Citations (Scopus)

• Nonlinear Biosynthetic Gene Cluster Dose Effect on Penicillin Production by Penicillium chrysogenum

  Nijland, J. G., Ebbendorf, B., Woszczynska, M., Boer, R., Bovenberg, R. A. L. & Driessen, A. J. M., Nov-2010, In: Applied and environmental microbiology. 76, 21, p. 7109-7115 7 p.

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• Peroxisomes are required for efficient penicillin biosynthesis in Penicillium chrysogenum

  Meijer, W. H., Gidijala, L., Fekken, S., Kiel, J. A. K. W., van den Berg, M. A., Lascaris, R., Bovenberg, R. A. L. & van der Klei, I. J., Sept-2010, In: Applied and environmental microbiology. 76, 17, p. 5702-5709 8 p.

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• The Penicillium chrysogenum aclA gene encodes a broad-substrate-specificity acyl-coenzyme A ligase involved in activation of adipic acid, a side-chain precursor for cephem antibiotics

  Koetsier, M. J., Gombert, A. K., Fekken, S., Bovenberg, R. A. L., Van den Berg, M. A., Kiel, J. A. K. W., Jekel, P. A., Janssen, D. B., Pronk, J. T., Van der Klei, I. J. & Daran, J-M., Jan-2010, In: Fungal Genetics and Biology. 47, 1, p. 33-42 10 p.

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  28 Citations (Scopus)

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• The Sequence of a 1.8-Mb Bacterial Linear Plasmid Reveals a Rich Evolutionary Reservoir of Secondary Metabolic Pathways

  Medema, M. H., Trefzer, A., Kovalchuk, A., van den Berg, M., Muller, U., Heijne, W., Wu, L., Alam, M. T., Ronning, C. M., Nierman, W. C., Bovenberg, R. A. L., Breitling, R. & Takano, E., 2010, In: Genome Biology and Evolution. 2, p. 212-224 13 p.

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• 2009

  An Engineered Yeast Efficiently Secreting Penicillin

  Gidijala, L., Kiel, J. A. K. W., Douma, R. D., Seifar, R. M., van Gulik, W. M., Bovenberg, R. A. L., Veenhuis, M. & van der Klei, I. J., 15-Dec-2009, In: PLoS ONE. 4, 12, 9 p., 8317.

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• Characterization of a phenylacetate-CoA ligase from Penicillium chrysogenum

  Koetsier, M. J., Jekel, P. A., van den Berg, M. A., Bovenberg, R. A. L. & Janssen, D. B., 15-Jan-2009, In: Biochemical Journal. 417, p. 467-476 10 p.

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• Matching the proteome to the genome: the microbody of penicillin-producing Penicillium chrysogenum cells

  Kiel, J. A. K. W., van den Berg, M. A., Fusetti, F., Poolman, B., Bovenberg, R. A. L., Veenhuis, M. & van der Klei, I. J., May-2009, In: FUNCTIONAL & INTEGRATIVE GENOMICS. 9, 2, p. 167-184 18 p.

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• 2008

  Expression of the transporter encoded by the cefT gene of Acremonium chrysogenum increases cephalosporin production in Penicillium chrysogenum

  Nijland, J. G., Kovalchuk, A., van den Berg, M. A., Bovenberg, R. A. L. & Driessen, A. J. M., Oct-2008, In: Fungal Genetics and Biology. 45, 10, p. 1415-1421 7 p.

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  38 Citations (Scopus)

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• Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

  van den Berg, M. A., Albang, R., Albermann, K., Badger, J. H., Daran, J-M., Driessen, A. J. M., Garcia-Estrada, C., Fedorova, N. D., Harris, D. M., Heijne, W. H. M., Joardar, V., Kiel, J. A. K. W., Kovalchuk, A., Martin, J. F., Nierman, W. C., Nijland, J. G., Pronk, J. T., Roubos, J. A., van der Klei, I. J., van Peij, N. N. M. E., & 5 othersVeenhuis, M., von Doehren, H., Wagner, C., Wortman, J. & Bovenberg, R. A. L., Oct-2008, In: Nature Biotechnology. 26, 10, p. 1161-1168 8 p.

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• Production of functionally active Penicillium chrysogenum isopenicillin N synthase in the yeast Hansenula polymorpha

  Gidijala, L., Bovenberg, R. A. L., Klaassen, P., van der Klei, I. J., Veenhuis, M. & Kiel, J. A. K. W., 19-Mar-2008, In: BMC Biotechnology. 8, 1, 8 p., 29.

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• 2005

  Overproduction of a single protein, Pc-Pex 11p, results in 2-fold enhanced penicillin production by Penicillium chrysogenum

  Kiel, J. A. K. W., van der Klei, I. J., van den Berg, M. A., Bovenberg, R. A. L. & Veenhuis, M., Feb-2005, In: Fungal Genetics and Biology. 42, 2, p. 154 - 164 11 p.

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  87 Citations (Scopus)

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• Synthesis of Penicillium chrysogenum acetyl-CoA: Isopenicillin N acyltransferase in Hansenula polymorpha: First step towards the introduction of a new metabolic pathway

  Lutz, M. V., Bovenberg, R. A. L., Klei, I. J. V. D. & Veenhuis, M., 2005, In: Fems Yeast Research. 5, 11, p. 1063-1067 5 p.

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• 2004

  Penicillium chrysogenum Pex5p mediates differential sorting of PTS1 proteins to microbodies of the methylotrophic yeast Hansenula polymorpha

  Kiel, J. A. K. W., Berg, M. V. D., Bovenberg, R. A. L., Klei, I. J. V. D. & Veenhuis, M., 2004, In: Fungal Genetics and Biology. 41, 7, p. 708 - 720 13 p.

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  20 Citations (Scopus)

  77 Downloads (Pure)