Bacterial killing and the dimensions of bacterial death

Renfei Wu, Cong Li, Jiuyi Li, Jelmer Sjollema, Gésinda I Geertsema-Doornbusch, H Willy de Haan-Visser, Emma S C Dijkstra, Yijin Ren, Zexin Zhang, Jian Liu, Hans C Flemming, Henk J Busscher, Henny C van der Mei*

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

1 Citation (Scopus)
17 Downloads (Pure)

Abstract

Bacteria can be dead, alive, or exhibit slowed or suspended life forms, making bacterial death difficult to establish. Here, agar-plating, microscopic-counting, SYTO9/propidium-iodide staining, MTT-conversion, and bioluminescence-imaging were used to determine bacterial death upon exposure to different conditions. Rank correlations between pairs of assay outcomes were low, indicating different assays measure different aspects of bacterial death. Principal-component analysis yielded two principal components, named "reproductive-ability" (PC1) and "metabolic-activity" (PC2). Plotting of these principal components in two-dimensional space revealed a dead region, with borders defined by the PC1 and PC2 values. Sensu stricto implies an unpractical reality that all assays determining PC1 and PC2 must be carried out in order to establish bacterial death. Considering this unpracticality, it is suggested that at least one assay determining reproductive activity (PC1) and one assay determining metabolic activity (PC2) should be used to establish bacterial death. Minimally, researchers should specifically describe which dimension of bacterial death is assessed, when addressing bacterial death.

Original languageEnglish
Article number87
Number of pages8
JournalNPJ biofilms and microbiomes
Volume10
Issue number1
DOIs
Publication statusPublished - 17-Sept-2024

Keywords

  • Microbial Viability
  • Bacteria/classification
  • Principal Component Analysis
  • Luminescent Measurements/methods

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