Computational Study on the Dynamics of a Bis(benzoxazole)-Based Overcrowded Alkene

Charlotte N Stindt, Taegeun Jo, Jorn D Steen, Ben L Feringa*, Stefano Crespi*

*Corresponding author for this work

Research output: Contribution to journalArticleAcademicpeer-review

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Abstract

Understanding and controlling molecular motions is of pivotal importance for designing molecular machinery and functional molecular systems, capable of performing complex tasks. Herein, we report a comprehensive theoretical study to elucidate the dynamic behavior of a bis(benzoxazole)-based overcrowded alkene displaying several coupled and uncoupled molecular motions. The benzoxazole moieties give rise to 4 different stable conformers that interconvert through single-bond rotations. By performing excited- and ground-state molecular dynamics simulations, DFT calculations, and NMR studies, we found that the photochemical E-Z isomerization of the central double bond of each stable conformer is directional and leads to a mixture of metastable isomers. This transformation is analogous to the classical Feringa-type molecular motors, with the notable difference that, during the photochemical isomerization and the subsequent thermal helix inversion (THI) steps, multiple possible pathways take place that involve single-bond rotations that can be both coupled and uncoupled to the rotation of the naphthyl half of the molecule.

Original languageEnglish
Article number4c06773
Pages (from-to)1301–1309
Number of pages9
JournalThe journal of physical chemistry. A
Volume129
Issue number5
Early online date23-Jan-2025
DOIs
Publication statusPublished - 6-Feb-2025

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