TY - JOUR
T1 - Further molecular and clinical delineation of co-locating 17p13.3 microdeletions and microduplications that show distinctive phenotypes
AU - Bruno, Damien L.
AU - Anderlid, Britt-Marie
AU - Lindstrand, Anna
AU - van Ravenswaaij-Arts, Conny
AU - Ganesamoorthy, Devika
AU - Lundin, Johanna
AU - Martin, Christa Lese
AU - Douglas, Jessica
AU - Nowak, Catherine
AU - Adam, Margaret P.
AU - Kooy, R. Frank
AU - Van der Aa, Nathalie
AU - Reyniers, Edwin
AU - Vandeweyer, Geert
AU - Stolte-Dijkstra, Irene
AU - Dijkhuizen, Trijnie
AU - Yeung, Alison
AU - Delatycki, Martin
AU - Borgstrom, Birgit
AU - Thelin, Lena
AU - Cardoso, Carlos
AU - van Bon, Bregje
AU - Pfundt, Rolph
AU - de Vries, Bert B. A.
AU - Wallin, Anders
AU - Amor, David J.
AU - James, Paul A.
AU - Slater, Howard R.
AU - Schoumans, Jacqueline
PY - 2010/5
Y1 - 2010/5
N2 - Background Chromosome 17p13.3 contains extensive repetitive sequences and is a recognised region of genomic instability. Haploinsufficiency of PAFAH1B1 (encoding LIS1) causes either isolated lissencephaly sequence or Miller-Dieker syndrome, depending on the size of the deletion. More recently, both microdeletions and microduplications mapping to the Miller-Dieker syndrome telomeric critical region have been identified and associated with distinct but overlapping phenotypes.Methods Genome-wide microarray screening was performed on 7678 patients referred with unexplained learning difficulties and/or autism, with or without other congenital abnormalities. Eight and five unrelated individuals, respectively, were identified with microdeletions and microduplications in 17p13.3.Results Comparisons with six previously reported microdeletion cases identified a 258 kb critical region, encompassing six genes including CRK (encoding Crk) and YWHAE (encoding 14-3-3 epsilon). Clinical features included growth retardation, facial dysmorphism and developmental delay. Notably, one individual with only subtle facial features and an interstitial deletion involving CRK but not YWHAE suggested that a genomic region spanning 109 kb, encompassing two genes (TUSC5 and YWHAE), is responsible for the main facial dysmorphism phenotype. Only the microduplication phenotype included autism. The microduplication minimal region of overlap for the new and previously reported cases spans 72 kb encompassing a single gene, YWHAE. These genomic rearrangements were not associated with low-copy repeats and are probably due to diverse molecular mechanisms.Conclusions The authors further characterise the 17p13.3 microdeletion and microduplication phenotypic spectrum and describe a smaller critical genomic region allowing identification of candidate genes for the distinctive facial dysmorphism (microdeletions) and autism (microduplications) manifestations.
AB - Background Chromosome 17p13.3 contains extensive repetitive sequences and is a recognised region of genomic instability. Haploinsufficiency of PAFAH1B1 (encoding LIS1) causes either isolated lissencephaly sequence or Miller-Dieker syndrome, depending on the size of the deletion. More recently, both microdeletions and microduplications mapping to the Miller-Dieker syndrome telomeric critical region have been identified and associated with distinct but overlapping phenotypes.Methods Genome-wide microarray screening was performed on 7678 patients referred with unexplained learning difficulties and/or autism, with or without other congenital abnormalities. Eight and five unrelated individuals, respectively, were identified with microdeletions and microduplications in 17p13.3.Results Comparisons with six previously reported microdeletion cases identified a 258 kb critical region, encompassing six genes including CRK (encoding Crk) and YWHAE (encoding 14-3-3 epsilon). Clinical features included growth retardation, facial dysmorphism and developmental delay. Notably, one individual with only subtle facial features and an interstitial deletion involving CRK but not YWHAE suggested that a genomic region spanning 109 kb, encompassing two genes (TUSC5 and YWHAE), is responsible for the main facial dysmorphism phenotype. Only the microduplication phenotype included autism. The microduplication minimal region of overlap for the new and previously reported cases spans 72 kb encompassing a single gene, YWHAE. These genomic rearrangements were not associated with low-copy repeats and are probably due to diverse molecular mechanisms.Conclusions The authors further characterise the 17p13.3 microdeletion and microduplication phenotypic spectrum and describe a smaller critical genomic region allowing identification of candidate genes for the distinctive facial dysmorphism (microdeletions) and autism (microduplications) manifestations.
KW - MENTAL-RETARDATION
KW - GENOMIC HYBRIDIZATION
KW - NUMBER VARIATION
KW - DIEKER-SYNDROME
KW - ALU REPEATS
KW - REARRANGEMENTS
KW - ARRAY
KW - DELETIONS
KW - IMPACT
KW - GENE
U2 - 10.1136/jmg.2009.069906
DO - 10.1136/jmg.2009.069906
M3 - Article
SN - 0022-2593
VL - 47
SP - 299
EP - 311
JO - Journal of Medical Genetics
JF - Journal of Medical Genetics
IS - 5
ER -