Genomics and the origin of species

Ole Seehausen; Roger K. Butlin; Irene Keller; Catherine E. Wagner; Janette W. Boughman; Paul A. Hohenlohe; Catherine L. Peichel; Glenn-Peter Saetre; Claudia Bank; Åke Brännström; Alan Brelsford; Chris S. Clarkson; Fabrice Eroukhmanoff; Jeffrey L. Feder; Martin C. Fischer; Andrew D. Foote; Paolo Franchini; Chris D. Jiggins; Felicity C. Jones; Anna K. Lindholm; Kay Lucek; Martine E. Maan; David A. Marques; Simon H. Martin; Blake Matthews; Joana I. Meier; Markus Möst; Michael W. Nachman; Etsuko Nonaka; Diana J. Rennison; Julia Schwarzer; Eric T. Watson; Anja M. Westram; Alex Widmer

doi:10.1038/nrg3644

Genomics and the origin of species

Ole Seehausen^*, Roger K. Butlin, Irene Keller, Catherine E. Wagner, Janette W. Boughman, Paul A. Hohenlohe, Catherine L. Peichel, Glenn-Peter Saetre, Claudia Bank, Åke Brännström, Alan Brelsford, Chris S. Clarkson, Fabrice Eroukhmanoff, Jeffrey L. Feder, Martin C. Fischer, Andrew D. Foote, Paolo Franchini, Chris D. Jiggins, Felicity C. Jones, Anna K. LindholmKay Lucek, Martine E. Maan, David A. Marques, Simon H. Martin, Blake Matthews, Joana I. Meier, Markus Möst, Michael W. Nachman, Etsuko Nonaka, Diana J. Rennison, Julia Schwarzer, Eric T. Watson, Anja M. Westram, Alex Widmer

^*Corresponding author for this work

Research output: Contribution to journal › Review article › Academic › peer-review

567 Citations (Scopus)

Abstract

Speciation is a fundamental evolutionary process, the knowledge of which is crucial for understanding the origins of biodiversity. Genomic approaches are an increasingly important aspect of this research field. We review current understanding of genome-wide effects of accumulating reproductive isolation and of genomic properties that influence the process of speciation. Building on this work, we identify emergent trends and gaps in our understanding, propose new approaches to more fully integrate genomics into speciation research, translate speciation theory into hypotheses that are testable using genomic tools and provide an integrative definition of the field of speciation genomics.

Original language	English
Pages (from-to)	176-192
Number of pages	17
Journal	Nature Reviews Genetics
Volume	15
Issue number	3
DOIs	https://doi.org/10.1038/nrg3644
Publication status	Published - Mar-2014

Keywords

DOBZHANSKY-MULLER INCOMPATIBILITIES
WITH-GENE-FLOW
FEMALE MATING PREFERENCE
REPRODUCTIVE ISOLATION
SEXUAL SELECTION
G-MATRIX
ECOLOGICAL SPECIATION
ADAPTIVE RADIATION
HYBRID STERILITY
CICHLID FISH

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Seehausen, O., Butlin, R. K., Keller, I., Wagner, C. E., Boughman, J. W., Hohenlohe, P. A., Peichel, C. L., Saetre, G-P., Bank, C., Brännström, Å., Brelsford, A., Clarkson, C. S., Eroukhmanoff, F., Feder, J. L., Fischer, M. C., Foote, A. D., Franchini, P., Jiggins, C. D., Jones, F. C., ... Widmer, A. (2014). Genomics and the origin of species. Nature Reviews Genetics, 15(3), 176-192. https://doi.org/10.1038/nrg3644

Seehausen, Ole ; Butlin, Roger K. ; Keller, Irene ; Wagner, Catherine E. ; Boughman, Janette W. ; Hohenlohe, Paul A. ; Peichel, Catherine L. ; Saetre, Glenn-Peter ; Bank, Claudia ; Brännström, Åke ; Brelsford, Alan ; Clarkson, Chris S. ; Eroukhmanoff, Fabrice ; Feder, Jeffrey L. ; Fischer, Martin C. ; Foote, Andrew D. ; Franchini, Paolo ; Jiggins, Chris D. ; Jones, Felicity C. ; Lindholm, Anna K. ; Lucek, Kay ; Maan, Martine E. ; Marques, David A. ; Martin, Simon H. ; Matthews, Blake ; Meier, Joana I. ; Möst, Markus ; Nachman, Michael W. ; Nonaka, Etsuko ; Rennison, Diana J. ; Schwarzer, Julia ; Watson, Eric T. ; Westram, Anja M. ; Widmer, Alex. / Genomics and the origin of species. In: Nature Reviews Genetics. 2014 ; Vol. 15, No. 3. pp. 176-192.

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abstract = "Speciation is a fundamental evolutionary process, the knowledge of which is crucial for understanding the origins of biodiversity. Genomic approaches are an increasingly important aspect of this research field. We review current understanding of genome-wide effects of accumulating reproductive isolation and of genomic properties that influence the process of speciation. Building on this work, we identify emergent trends and gaps in our understanding, propose new approaches to more fully integrate genomics into speciation research, translate speciation theory into hypotheses that are testable using genomic tools and provide an integrative definition of the field of speciation genomics.",

keywords = "DOBZHANSKY-MULLER INCOMPATIBILITIES, WITH-GENE-FLOW, FEMALE MATING PREFERENCE, REPRODUCTIVE ISOLATION, SEXUAL SELECTION, G-MATRIX, ECOLOGICAL SPECIATION, ADAPTIVE RADIATION, HYBRID STERILITY, CICHLID FISH",

author = "Ole Seehausen and Butlin, {Roger K.} and Irene Keller and Wagner, {Catherine E.} and Boughman, {Janette W.} and Hohenlohe, {Paul A.} and Peichel, {Catherine L.} and Glenn-Peter Saetre and Claudia Bank and {\AA}ke Br{\"a}nnstr{\"o}m and Alan Brelsford and Clarkson, {Chris S.} and Fabrice Eroukhmanoff and Feder, {Jeffrey L.} and Fischer, {Martin C.} and Foote, {Andrew D.} and Paolo Franchini and Jiggins, {Chris D.} and Jones, {Felicity C.} and Lindholm, {Anna K.} and Kay Lucek and Maan, {Martine E.} and Marques, {David A.} and Martin, {Simon H.} and Blake Matthews and Meier, {Joana I.} and Markus M{\"o}st and Nachman, {Michael W.} and Etsuko Nonaka and Rennison, {Diana J.} and Julia Schwarzer and Watson, {Eric T.} and Westram, {Anja M.} and Alex Widmer",

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Seehausen, O, Butlin, RK, Keller, I, Wagner, CE, Boughman, JW, Hohenlohe, PA, Peichel, CL, Saetre, G-P, Bank, C, Brännström, Å, Brelsford, A, Clarkson, CS, Eroukhmanoff, F, Feder, JL, Fischer, MC, Foote, AD, Franchini, P, Jiggins, CD, Jones, FC, Lindholm, AK, Lucek, K, Maan, ME, Marques, DA, Martin, SH, Matthews, B, Meier, JI, Möst, M, Nachman, MW, Nonaka, E, Rennison, DJ, Schwarzer, J, Watson, ET, Westram, AM & Widmer, A 2014, 'Genomics and the origin of species', Nature Reviews Genetics, vol. 15, no. 3, pp. 176-192. https://doi.org/10.1038/nrg3644

Genomics and the origin of species. / Seehausen, Ole; Butlin, Roger K.; Keller, Irene; Wagner, Catherine E.; Boughman, Janette W.; Hohenlohe, Paul A.; Peichel, Catherine L.; Saetre, Glenn-Peter; Bank, Claudia; Brännström, Åke; Brelsford, Alan; Clarkson, Chris S.; Eroukhmanoff, Fabrice; Feder, Jeffrey L.; Fischer, Martin C.; Foote, Andrew D.; Franchini, Paolo; Jiggins, Chris D.; Jones, Felicity C.; Lindholm, Anna K.; Lucek, Kay; Maan, Martine E.; Marques, David A.; Martin, Simon H.; Matthews, Blake; Meier, Joana I.; Möst, Markus; Nachman, Michael W.; Nonaka, Etsuko; Rennison, Diana J.; Schwarzer, Julia; Watson, Eric T.; Westram, Anja M.; Widmer, Alex.

In: Nature Reviews Genetics, Vol. 15, No. 3, 03.2014, p. 176-192.

Research output: Contribution to journal › Review article › Academic › peer-review

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T1 - Genomics and the origin of species

AU - Seehausen, Ole

AU - Butlin, Roger K.

AU - Keller, Irene

AU - Wagner, Catherine E.

AU - Boughman, Janette W.

AU - Hohenlohe, Paul A.

AU - Peichel, Catherine L.

AU - Saetre, Glenn-Peter

AU - Bank, Claudia

AU - Brännström, Åke

AU - Brelsford, Alan

AU - Clarkson, Chris S.

AU - Eroukhmanoff, Fabrice

AU - Feder, Jeffrey L.

AU - Fischer, Martin C.

AU - Foote, Andrew D.

AU - Franchini, Paolo

AU - Jiggins, Chris D.

AU - Jones, Felicity C.

AU - Lindholm, Anna K.

AU - Lucek, Kay

AU - Maan, Martine E.

AU - Marques, David A.

AU - Martin, Simon H.

AU - Matthews, Blake

AU - Meier, Joana I.

AU - Möst, Markus

AU - Nachman, Michael W.

AU - Nonaka, Etsuko

AU - Rennison, Diana J.

AU - Schwarzer, Julia

AU - Watson, Eric T.

AU - Westram, Anja M.

AU - Widmer, Alex

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N2 - Speciation is a fundamental evolutionary process, the knowledge of which is crucial for understanding the origins of biodiversity. Genomic approaches are an increasingly important aspect of this research field. We review current understanding of genome-wide effects of accumulating reproductive isolation and of genomic properties that influence the process of speciation. Building on this work, we identify emergent trends and gaps in our understanding, propose new approaches to more fully integrate genomics into speciation research, translate speciation theory into hypotheses that are testable using genomic tools and provide an integrative definition of the field of speciation genomics.

AB - Speciation is a fundamental evolutionary process, the knowledge of which is crucial for understanding the origins of biodiversity. Genomic approaches are an increasingly important aspect of this research field. We review current understanding of genome-wide effects of accumulating reproductive isolation and of genomic properties that influence the process of speciation. Building on this work, we identify emergent trends and gaps in our understanding, propose new approaches to more fully integrate genomics into speciation research, translate speciation theory into hypotheses that are testable using genomic tools and provide an integrative definition of the field of speciation genomics.

KW - DOBZHANSKY-MULLER INCOMPATIBILITIES

KW - WITH-GENE-FLOW

KW - FEMALE MATING PREFERENCE

KW - REPRODUCTIVE ISOLATION

KW - SEXUAL SELECTION

KW - G-MATRIX

KW - ECOLOGICAL SPECIATION

KW - ADAPTIVE RADIATION

KW - HYBRID STERILITY

KW - CICHLID FISH

U2 - 10.1038/nrg3644

DO - 10.1038/nrg3644

M3 - Review article

VL - 15

SP - 176

EP - 192

JO - Nature Reviews Genetics

JF - Nature Reviews Genetics

SN - 1471-0056

IS - 3

ER -