Abstract
We have used ab initio calculations to compute all of the tensor elements of the electric field gradient for each carbon-deuterium bond in the ring of deuterated 3-methyl-indole. Previous analyses have ignored the smaller tensor elements perpendicular to principal component Vzz which is aligned with the C-2H bond (local bond z-axis). At each ring position, the smallest element Vxx is in the molecular plane and Vyy is normal to the plane of the ring. The asymmetry parameter = (Vyy - Vxx)/Vzz ranges from 0.07 at C4 to 0.11 at C2. We used the perpendicular (off-bond) tensor elements, in concert with an improved understanding of the indole ring geometry, to analyze prototype 2H NMR spectra from well-oriented, hydrated peptide/lipid samples. For each of the four tryptophans of membrane-spanning gramicidin A (gA) channels, the inclusion of the perpendicular elements changes the deduced ring tilt by nearly 10 and increases the ring principal order parameter Szz for overall "wobble" with respect to the membrane normal (molecular z-axis). With the improved analysis, the magnitude of Szz for the outermost indole rings of Trp13 and Trp15 is indistinguishable from that observed previously for backbone atoms (0.93 +/- 0.03). For the Trp9 and Trp11 rings, which are slightly more buried within the membrane, Szz is slightly lower (0.86 +/- 0.03). The results show that the perpendicular elements are important for the detailed analysis of 2H NMR spectra from aromatic ring systems.
Original language | English |
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Pages (from-to) | 17488-17493 |
Number of pages | 6 |
Journal | Journal of the American Chemical Society |
Volume | 127 |
Issue number | 49 |
DOIs | |
Publication status | Published - 14-Dec-2005 |
Externally published | Yes |
Keywords
- Deuterium/chemistry
- Magnetic Resonance Spectroscopy
- Molecular Structure
- Skatole/chemistry
- NUCLEAR-MAGNETIC-RESONANCE
- GRAMICIDIN TRANSMEMBRANE CHANNEL
- QUADRUPOLE COUPLING-CONSTANTS
- LIPID-BILAYER ENVIRONMENT
- ORIENTED DMPC BILAYERS
- SOLID-STATE NMR
- SIDE-CHAINS
- WAVE-FUNCTIONS
- DEUTERIUM NMR
- DYNAMICS