Optimized co-solute paramagnetic relaxation enhancement for the rapid NMR analysis of a highly fibrillogenic peptide

Nur Alia Oktaviani, Michael W. Risor, Young-Ho Lee, Rik P. Megens, Djurre H. de Jong, Renee Otten, Ruud M. Scheek, Jan J. Enghild, Niels Chr. Nielsen, Takahisa Ikegami, Frans A.A. Mulder

Research output: Contribution to journalArticleAcademicpeer-review

24 Citations (Scopus)
127 Downloads (Pure)

Abstract

Co-solute paramagnetic relaxation enhancement (PRE) is an attractive way to speed up data acquisition in NMR spectroscopy by shortening the T (1) relaxation time of the nucleus of interest and thus the necessary recycle delay. Here, we present the rationale to utilize high-spin iron(III) as the optimal transition metal for this purpose and characterize the properties of its neutral chelate form Fe(DO3A) as a suitable PRE agent. Fe(DO3A) effectively reduces the T (1) values across the entire sequence of the intrinsically disordered protein alpha-synuclein with negligible impact on line width. The agent is better suited than currently used alternatives, shows no specific interaction with the polypeptide chain and, due to its high relaxivity, is effective at low concentrations and in 'proton-less' NMR experiments. By using Fe(DO3A) we were able to complete the backbone resonance assignment of a highly fibrillogenic peptide from alpha(1)-antitrypsin by acquiring the necessary suite of multidimensional NMR datasets in 3 h.

Original languageEnglish
Pages (from-to)129-142
Number of pages14
JournalJournal of Biomolecular Nmr
Volume62
Issue number2
DOIs
Publication statusPublished - Jun-2015

Keywords

  • Paramagnetic relaxation enhancement
  • Intrinsically disordered proteins
  • Fe(DO3A)
  • alpha(1)-Antitrypsin
  • Amyloid beta-peptides
  • NMR spectroscopy
  • SENSITIVITY ENHANCEMENT
  • FIBRIL FORMATION
  • SPECTROSCOPY
  • PROTEINS
  • IDENTIFICATION
  • SPECTRA
  • DESIGN

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