Abstract
In this contribution, we review recent developments and applications of a dynamic clustering algorithm SWINGER tailored for the multiscale molecular simulations of biomolecular systems. The algorithm on-the-fly redistributes solvent molecules among supramolecular clusters. In particular, we focus on its applications in combination with the adaptive resolution scheme, which concurrently couples atomistic and coarse-grained molecular representations. We showcase the versatility of our multiscale approach on a few applications to biomolecular systems coupling atomistic and supramolecular water models such as the well-established MARTINI and dissipative particle dynamics models and provide an outlook for future work.
| Original language | English |
|---|---|
| Article number | 20180075 |
| Number of pages | 10 |
| Journal | Interface Focus |
| Volume | 9 |
| Issue number | 3 |
| DOIs | |
| Publication status | Published - 19-Apr-2019 |
Keywords
- molecular dynamics
- adaptive resolution
- supramolecular coupling