Data from: How reliably can we infer diversity-dependent diversification from phylogenies?

  • Rampal Etienne (Creator)
  • Alexander Pigot (Creator)
  • Albert B. Phillimore (Creator)

Dataset

Description

The data package contains seven datasets:
- Second batch of .RData files of the tree simulations under the CR and DD models.
- First of two batches of .RData files of the trees simulation under the CR and DD models and the R-script that generated both batches.
- RData files with maximum likelihoods and corresponding parameter estimates under the constant-rate (CR) model, and the R-script that generated them.
- RData files with maximum likelihoods and corresponding parameter estimates under the diversity-dependent model, and the R-script that generated them. The starting values of the optimization are the simulation values.
- RData files with maximum likelihoods and corresponding parameter estimates under the diversity-dependent model, and the R-script that generated them. The starting values of the optimization are the results from the CR models fits with a large but finite carrying capacity..
- R-script to make plots from simulation results
- RData file of the bootstrap likelihood ratio test results of the Dendroica case study.
Datum van beschikbaarheid27-apr-2016
UitgeverUniversity of Groningen

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