TY - JOUR
T1 - Implementation and validation of time-of-flight PET image reconstruction module for listmode and sinogram projection data in the STIR library
AU - Efthimiou, Nikos
AU - Emond, Elise
AU - Wadhwa, Palak
AU - Cawthorne, Christopher
AU - Tsoumpas, Charalampos
AU - Thielemans, Kris
N1 - Funding Information:
Dr Nikos Efthimiou was partially supported by the European Cooperation for Science and Technology Action TD1401: Fast Advanced Scintillation Timing (http://cern.ch/fast-cost), and acknowledges the receipt of an Allam Postdoctoral Fellowship.We thank Dr Assem Allam and his family for the generous donation to help found the PET Research Centre at the University of Hull and for their continued support. Elise Emond acknowledges funding support from GlaxoSmithKline to UCL (BIDS3000030921). Palak Wadhwa is supported by a Medical Research Council Industrial Case PhD Studentship (MR/M01746X/1) and Dr Charalampos Tsoumpas is supported by a Royal Society Industry Fellowship (IF170011). Dr N Efthimiou and P Wadhwa received support from the CCP PET-MR (EPSRC grant EP/M022587/1). The authors would like to express their gratitude to Prof Daniel Lesnic (University of Leeds) for his valuable comments and suggestions.
Publisher Copyright:
© 2019 Institute of Physics and Engineering in Medicine.
PY - 2019/1/22
Y1 - 2019/1/22
N2 - In this paper, we describe the implementation of support for time-of-flight (TOF) positron emission tomography (PET) for both listmode and sinogram data in the open source software for tomographic image reconstruction (STIR). We provide validation and performance characterization using simulated data from the open source GATE Monte Carlo toolbox, with TOF configurations spanning from 81.2 to 209.6 ps. The coincidence detector resolution was corrected for the timing resolution deterioration due to the contribution of the crystal length. Comparison between the reconstruction of listmode and sinogram data demonstrated good agreement in both TOF and non-TOF cases in terms of relative absolute error. To reduce the reconstruction time, we assessed the truncation of the TOF kernel along lines-of-response (LOR). Rejection of LOR elements beyond four times the TOF standard deviation provides significant acceleration of ∼45% without compromising the image quality. Further narrowing of the kernel can provide extra time reduction but with the gradual introduction of error in the reconstructed images. As expected, TOF reconstruction performs better than non-TOF in terms of both contrast-recovery-coefficient (CRC) and signal-tonoise ratio (SNR). CRC achieves convergence faster with TOF, at lower noise levels. SNR with TOF was superior for early iterations, but with quick deterioration. Higher timing resolution further improved reconstruction performance, while TOF bin mashing was shown to have only a small impact on reconstructed images.
AB - In this paper, we describe the implementation of support for time-of-flight (TOF) positron emission tomography (PET) for both listmode and sinogram data in the open source software for tomographic image reconstruction (STIR). We provide validation and performance characterization using simulated data from the open source GATE Monte Carlo toolbox, with TOF configurations spanning from 81.2 to 209.6 ps. The coincidence detector resolution was corrected for the timing resolution deterioration due to the contribution of the crystal length. Comparison between the reconstruction of listmode and sinogram data demonstrated good agreement in both TOF and non-TOF cases in terms of relative absolute error. To reduce the reconstruction time, we assessed the truncation of the TOF kernel along lines-of-response (LOR). Rejection of LOR elements beyond four times the TOF standard deviation provides significant acceleration of ∼45% without compromising the image quality. Further narrowing of the kernel can provide extra time reduction but with the gradual introduction of error in the reconstructed images. As expected, TOF reconstruction performs better than non-TOF in terms of both contrast-recovery-coefficient (CRC) and signal-tonoise ratio (SNR). CRC achieves convergence faster with TOF, at lower noise levels. SNR with TOF was superior for early iterations, but with quick deterioration. Higher timing resolution further improved reconstruction performance, while TOF bin mashing was shown to have only a small impact on reconstructed images.
KW - computer simulations
KW - medical imaging
KW - Monte Carlo
KW - open-source software
KW - positron emission tomography
KW - radionuclide imaging
KW - time-of-flight
U2 - 10.1088/1361-6560/aaf9b9
DO - 10.1088/1361-6560/aaf9b9
M3 - Article
C2 - 30566915
AN - SCOPUS:85060254302
SN - 0031-9155
VL - 64
JO - Physics in Medicine and Biology
JF - Physics in Medicine and Biology
IS - 3
M1 - 035004
ER -