xQTL workbench: a scalable web environment for multi-level QTL analysis

Danny Arends; K. Joeri van der Velde; Pjotr Prins; Karl W. Broman; Steffen Moller; Ritsert C. Jansen; Morris A. Swertz

doi:10.1093/bioinformatics/bts049

xQTL workbench: a scalable web environment for multi-level QTL analysis

Danny Arends, K. Joeri van der Velde, Pjotr Prins, Karl W. Broman, Steffen Moller, Ritsert C. Jansen, Morris A. Swertz^*

^*Corresponding author voor dit werk

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xQTL workbench is a scalable web platform for the mapping of quantitative trait loci (QTLs) at multiple levels: for example gene expression (eQTL), protein abundance (pQTL), metabolite abundance (mQTL) and phenotype (phQTL) data. Popular QTL mapping methods for model organism and human populations are accessible via the web user interface. Large calculations scale easily on to multi-core computers, clusters and Cloud. All data involved can be uploaded and queried online: markers, genotypes, microarrays, NGS, LC-MS, GC-MS, NMR, etc. When new data types come available, xQTL workbench is quickly customized using the Molgenis software generator.

Originele taal-2	English
Pagina's (van-tot)	1042-1044
Aantal pagina's	3
Tijdschrift	Bioinformatics
Volume	28
Nummer van het tijdschrift	7
DOI's	https://doi.org/10.1093/bioinformatics/bts049
Status	Published - 1-apr.-2012

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abstract = "xQTL workbench is a scalable web platform for the mapping of quantitative trait loci (QTLs) at multiple levels: for example gene expression (eQTL), protein abundance (pQTL), metabolite abundance (mQTL) and phenotype (phQTL) data. Popular QTL mapping methods for model organism and human populations are accessible via the web user interface. Large calculations scale easily on to multi-core computers, clusters and Cloud. All data involved can be uploaded and queried online: markers, genotypes, microarrays, NGS, LC-MS, GC-MS, NMR, etc. When new data types come available, xQTL workbench is quickly customized using the Molgenis software generator.",

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author = "Danny Arends and {van der Velde}, {K. Joeri} and Pjotr Prins and Broman, {Karl W.} and Steffen Moller and Jansen, {Ritsert C.} and Swertz, {Morris A.}",

note = "Relation: http://www.rug.nl/fmns-research/gbb/index Rights: University of Groningen, Groningen Biomolecular Sciences and Biotechnology Institute (GBB)",

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doi = "10.1093/bioinformatics/bts049",

language = "English",

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AU - Arends, Danny

AU - van der Velde, K. Joeri

AU - Prins, Pjotr

AU - Broman, Karl W.

AU - Moller, Steffen

AU - Jansen, Ritsert C.

AU - Swertz, Morris A.

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AB - xQTL workbench is a scalable web platform for the mapping of quantitative trait loci (QTLs) at multiple levels: for example gene expression (eQTL), protein abundance (pQTL), metabolite abundance (mQTL) and phenotype (phQTL) data. Popular QTL mapping methods for model organism and human populations are accessible via the web user interface. Large calculations scale easily on to multi-core computers, clusters and Cloud. All data involved can be uploaded and queried online: markers, genotypes, microarrays, NGS, LC-MS, GC-MS, NMR, etc. When new data types come available, xQTL workbench is quickly customized using the Molgenis software generator.

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xQTL workbench: a scalable web environment for multi-level QTL analysis

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